Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 AD000864.1-201ENST00000624076 2295 ntBASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 ECEL1P2-201ENST00000461596 1295 ntBASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 AC080080.1-201ENST00000625121 2420 ntBASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS1Q9Y6A9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 ESPNP-201ENST00000270691 2015 ntBASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 AC135776.1-201ENST00000319817 2481 ntBASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 ABALON-201ENST00000629058 1903 ntBASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SPCS1Q9Y6A9 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 AC073592.3-201ENST00000625118 1834 ntBASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 FP325331.1-202ENST00000623531 1380 ntBASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SPCS1Q9Y6A9 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms