Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CALYQ9NYX4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CALYQ9NYX4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CALYQ9NYX4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CALYQ9NYX4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CALYQ9NYX4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALYQ9NYX4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CALYQ9NYX4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALYQ9NYX4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CALYQ9NYX4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALYQ9NYX4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALYQ9NYX4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALYQ9NYX4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALYQ9NYX4 Z82202.1-201ENST00000623446 1880 ntBASIC16.1■□□□□ 0.17
CALYQ9NYX4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALYQ9NYX4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALYQ9NYX4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.1■□□□□ 0.17
CALYQ9NYX4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CALYQ9NYX4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CALYQ9NYX4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALYQ9NYX4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALYQ9NYX4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.1■□□□□ 0.17
CALYQ9NYX4 AC026366.1-201ENST00000488803 879 ntBASIC16.1■□□□□ 0.17
CALYQ9NYX4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CALYQ9NYX4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.1■□□□□ 0.17
CALYQ9NYX4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.1■□□□□ 0.17
CALYQ9NYX4 AC008403.3-201ENST00000598924 454 ntBASIC16.1■□□□□ 0.17
CALYQ9NYX4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALYQ9NYX4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALYQ9NYX4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CALYQ9NYX4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALYQ9NYX4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CALYQ9NYX4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CALYQ9NYX4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CALYQ9NYX4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CALYQ9NYX4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CALYQ9NYX4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CALYQ9NYX4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
CALYQ9NYX4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CALYQ9NYX4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.09■□□□□ 0.17
CALYQ9NYX4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.09■□□□□ 0.17
CALYQ9NYX4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.09■□□□□ 0.17
CALYQ9NYX4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.09■□□□□ 0.17
CALYQ9NYX4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CALYQ9NYX4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.09■□□□□ 0.17
CALYQ9NYX4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CALYQ9NYX4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CALYQ9NYX4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.09■□□□□ 0.17
CALYQ9NYX4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CALYQ9NYX4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CALYQ9NYX4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CALYQ9NYX4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.09■□□□□ 0.17
CALYQ9NYX4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CALYQ9NYX4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CALYQ9NYX4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CALYQ9NYX4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.09■□□□□ 0.17
CALYQ9NYX4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CALYQ9NYX4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.08■□□□□ 0.17
CALYQ9NYX4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.08■□□□□ 0.17
CALYQ9NYX4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CALYQ9NYX4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CALYQ9NYX4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.08■□□□□ 0.16
CALYQ9NYX4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CALYQ9NYX4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CALYQ9NYX4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CALYQ9NYX4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CALYQ9NYX4 KRT17P3-201ENST00000420566 1262 ntBASIC16.08■□□□□ 0.16
CALYQ9NYX4 KRT18P16-201ENST00000510337 1294 ntBASIC16.08■□□□□ 0.16
CALYQ9NYX4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.08■□□□□ 0.16
CALYQ9NYX4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CALYQ9NYX4 KRT8P8-201ENST00000434750 1448 ntBASIC16.08■□□□□ 0.16
CALYQ9NYX4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.08■□□□□ 0.16
CALYQ9NYX4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.08■□□□□ 0.16
CALYQ9NYX4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.07■□□□□ 0.16
CALYQ9NYX4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CALYQ9NYX4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CALYQ9NYX4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CALYQ9NYX4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CALYQ9NYX4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CALYQ9NYX4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.07■□□□□ 0.16
CALYQ9NYX4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CALYQ9NYX4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CALYQ9NYX4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CALYQ9NYX4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CALYQ9NYX4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
CALYQ9NYX4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.07■□□□□ 0.16
CALYQ9NYX4 TUBB8P6-201ENST00000436895 1288 ntBASIC16.07■□□□□ 0.16
CALYQ9NYX4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.07■□□□□ 0.16
CALYQ9NYX4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CALYQ9NYX4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CALYQ9NYX4 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.07■□□□□ 0.16
CALYQ9NYX4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CALYQ9NYX4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.07■□□□□ 0.16
CALYQ9NYX4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CALYQ9NYX4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CALYQ9NYX4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CALYQ9NYX4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.07■□□□□ 0.16
CALYQ9NYX4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CALYQ9NYX4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.07■□□□□ 0.16
CALYQ9NYX4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms