Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 MIR718-201ENST00000390190 70 ntBASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PRDM9Q9NQV7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.39■□□□□ 0.54
PRDM9Q9NQV7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.54
PRDM9Q9NQV7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.39■□□□□ 0.54
PRDM9Q9NQV7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
PRDM9Q9NQV7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 AL353807.1-201ENST00000427475 662 ntBASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 AC093827.2-201ENST00000512654 315 ntBASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 HTR7P1-201ENST00000538670 1336 ntBASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRDM9Q9NQV7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 AC012618.2-201ENST00000428058 849 ntBASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRDM9Q9NQV7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 RPS2P55-201ENST00000397318 883 ntBASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 RPS2P4-201ENST00000476944 856 ntBASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 AC107956.1-201ENST00000494359 873 ntBASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 AP001412.1-201ENST00000608405 714 ntBASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRDM9Q9NQV7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms