Protein–RNA interactions for Protein: Q9NQC7

CYLD, Ubiquitin carboxyl-terminal hydrolase CYLD, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYLDQ9NQC7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.62■□□□□ 0.89
CYLDQ9NQC7 AP001412.1-201ENST00000608405 714 ntBASIC20.62■□□□□ 0.89
CYLDQ9NQC7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CYLDQ9NQC7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.62■□□□□ 0.89
CYLDQ9NQC7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CYLDQ9NQC7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CYLDQ9NQC7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CYLDQ9NQC7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CYLDQ9NQC7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CYLDQ9NQC7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CYLDQ9NQC7 TREX1-205ENST00000625293 1783 ntBASIC20.62■□□□□ 0.89
CYLDQ9NQC7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CYLDQ9NQC7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 AL049637.2-201ENST00000641778 930 ntBASIC20.61■□□□□ 0.89
CYLDQ9NQC7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 KRT8P8-201ENST00000434750 1448 ntBASIC20.61■□□□□ 0.89
CYLDQ9NQC7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CYLDQ9NQC7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CYLDQ9NQC7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CYLDQ9NQC7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.6■□□□□ 0.89
CYLDQ9NQC7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CYLDQ9NQC7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.6■□□□□ 0.89
CYLDQ9NQC7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CYLDQ9NQC7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CYLDQ9NQC7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.6■□□□□ 0.89
CYLDQ9NQC7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.6■□□□□ 0.89
CYLDQ9NQC7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CYLDQ9NQC7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.6■□□□□ 0.89
CYLDQ9NQC7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
CYLDQ9NQC7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CYLDQ9NQC7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CYLDQ9NQC7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.6■□□□□ 0.89
CYLDQ9NQC7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CYLDQ9NQC7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CYLDQ9NQC7 HTR7P1-201ENST00000538670 1336 ntBASIC20.59■□□□□ 0.89
CYLDQ9NQC7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CYLDQ9NQC7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CYLDQ9NQC7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CYLDQ9NQC7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CYLDQ9NQC7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CYLDQ9NQC7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CYLDQ9NQC7 AL353807.1-201ENST00000427475 662 ntBASIC20.59■□□□□ 0.89
CYLDQ9NQC7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CYLDQ9NQC7 SNORA78-201ENST00000459373 127 ntBASIC20.59■□□□□ 0.89
CYLDQ9NQC7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.59■□□□□ 0.89
CYLDQ9NQC7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.59■□□□□ 0.89
CYLDQ9NQC7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CYLDQ9NQC7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CYLDQ9NQC7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CYLDQ9NQC7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CYLDQ9NQC7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CYLDQ9NQC7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
CYLDQ9NQC7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CYLDQ9NQC7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CYLDQ9NQC7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.58■□□□□ 0.89
CYLDQ9NQC7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CYLDQ9NQC7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.58■□□□□ 0.89
CYLDQ9NQC7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CYLDQ9NQC7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.58■□□□□ 0.89
CYLDQ9NQC7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CYLDQ9NQC7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CYLDQ9NQC7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CYLDQ9NQC7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CYLDQ9NQC7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CYLDQ9NQC7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.58■□□□□ 0.89
CYLDQ9NQC7 AF186192.3-201ENST00000583427 947 ntBASIC20.58■□□□□ 0.89
CYLDQ9NQC7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CYLDQ9NQC7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.58■□□□□ 0.89
CYLDQ9NQC7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.58■□□□□ 0.89
CYLDQ9NQC7 AC113410.3-201ENST00000623366 203 ntBASIC20.58■□□□□ 0.89
CYLDQ9NQC7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.58■□□□□ 0.89
CYLDQ9NQC7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CYLDQ9NQC7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CYLDQ9NQC7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CYLDQ9NQC7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CYLDQ9NQC7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.58■□□□□ 0.88
CYLDQ9NQC7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms