Protein–RNA interactions for Protein: Q9HCG8

CWC22, Pre-mRNA-splicing factor CWC22 homolog, humanhuman

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC22Q9HCG8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.52■■□□□ 1.36
CWC22Q9HCG8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 AL390719.1-204ENST00000412397 1219 ntBASIC23.52■■□□□ 1.36
CWC22Q9HCG8 AC211429.1-201ENST00000415277 523 ntBASIC23.52■■□□□ 1.36
CWC22Q9HCG8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.52■■□□□ 1.36
CWC22Q9HCG8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CWC22Q9HCG8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 AC004408.2-201ENST00000623613 2777 ntBASIC23.51■■□□□ 1.35
CWC22Q9HCG8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 AC006557.6-201ENST00000623071 864 ntBASIC23.51■■□□□ 1.35
CWC22Q9HCG8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 KRT17P2-201ENST00000300992 1314 ntBASIC23.51■■□□□ 1.35
CWC22Q9HCG8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
CWC22Q9HCG8 AC087633.2-202ENST00000565166 1439 ntBASIC23.5■■□□□ 1.35
CWC22Q9HCG8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 AC012618.2-201ENST00000428058 849 ntBASIC23.5■■□□□ 1.35
CWC22Q9HCG8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 LINC01023-201ENST00000606054 436 ntBASIC23.5■■□□□ 1.35
CWC22Q9HCG8 AP001412.1-201ENST00000608405 714 ntBASIC23.5■■□□□ 1.35
CWC22Q9HCG8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CWC22Q9HCG8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC23.49■■□□□ 1.35
CWC22Q9HCG8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CWC22Q9HCG8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CWC22Q9HCG8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
CWC22Q9HCG8 RPS2P55-201ENST00000397318 883 ntBASIC23.49■■□□□ 1.35
CWC22Q9HCG8 AC107956.1-201ENST00000494359 873 ntBASIC23.49■■□□□ 1.35
CWC22Q9HCG8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.49■■□□□ 1.35
CWC22Q9HCG8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CWC22Q9HCG8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.49■■□□□ 1.35
CWC22Q9HCG8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.49■■□□□ 1.35
CWC22Q9HCG8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
CWC22Q9HCG8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CWC22Q9HCG8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CWC22Q9HCG8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CWC22Q9HCG8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CWC22Q9HCG8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms