Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
KDM4CQ9H3R0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 MIR718-201ENST00000390190 70 ntBASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 MIR2861-201ENST00000636310 90 ntBASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
KDM4CQ9H3R0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 AC233263.1-201ENST00000578059 224 ntBASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 KRT8P36-201ENST00000489121 1440 ntBASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
KDM4CQ9H3R0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 AC023632.3-201ENST00000521633 145 ntBASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 MTDHP1-201ENST00000605323 784 ntBASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.24■□□□□ 0.83
KDM4CQ9H3R0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms