Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR1EQ9GZS1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 AL158047.1-201ENST00000445918 881 ntBASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.74■□□□□ 0.75
POLR1EQ9GZS1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.73■□□□□ 0.75
POLR1EQ9GZS1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
POLR1EQ9GZS1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
POLR1EQ9GZS1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR1EQ9GZS1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR1EQ9GZS1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.71■□□□□ 0.75
POLR1EQ9GZS1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
POLR1EQ9GZS1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
POLR1EQ9GZS1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
POLR1EQ9GZS1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR1EQ9GZS1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
POLR1EQ9GZS1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR1EQ9GZS1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR1EQ9GZS1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR1EQ9GZS1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
POLR1EQ9GZS1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR1EQ9GZS1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
POLR1EQ9GZS1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms