Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 AL355472.2-201ENST00000422958 438 ntBASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 AC006058.3-201ENST00000606217 1069 ntBASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
FOXP3Q9BZS1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXP3Q9BZS1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXP3Q9BZS1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXP3Q9BZS1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXP3Q9BZS1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXP3Q9BZS1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXP3Q9BZS1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.06■□□□□ 0.8
FOXP3Q9BZS1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXP3Q9BZS1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXP3Q9BZS1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXP3Q9BZS1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXP3Q9BZS1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
FOXP3Q9BZS1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 KRT17P1-201ENST00000399211 1546 ntBASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXP3Q9BZS1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXP3Q9BZS1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms