Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA4Q9BXL8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CDCA4Q9BXL8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA4Q9BXL8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA4Q9BXL8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDCA4Q9BXL8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.38
CDCA4Q9BXL8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.46■□□□□ 0.38
CDCA4Q9BXL8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 LINC02228-203ENST00000641970 1355 ntBASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA4Q9BXL8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 LTB4R2-202ENST00000528054 3092 ntBASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 AC068880.1-201ENST00000507289 2297 ntBASIC17.44■□□□□ 0.38
CDCA4Q9BXL8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 AL512353.2-201ENST00000448759 1962 ntBASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.43■□□□□ 0.38
CDCA4Q9BXL8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms