Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.35■□□□□ 0.53
TUBA1CQ9BQE3 AC105020.6-201ENST00000621523 1217 ntBASIC18.35■□□□□ 0.53
TUBA1CQ9BQE3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.35■□□□□ 0.53
TUBA1CQ9BQE3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1CQ9BQE3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TUBA1CQ9BQE3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TUBA1CQ9BQE3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1CQ9BQE3 LINC01465-201ENST00000408887 1940 ntBASIC18.35■□□□□ 0.53
TUBA1CQ9BQE3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1CQ9BQE3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.35■□□□□ 0.53
TUBA1CQ9BQE3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 POU5F1P3-201ENST00000428824 1078 ntBASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1CQ9BQE3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TUBA1CQ9BQE3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.33■□□□□ 0.53
TUBA1CQ9BQE3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.33■□□□□ 0.53
TUBA1CQ9BQE3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
TUBA1CQ9BQE3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TUBA1CQ9BQE3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TUBA1CQ9BQE3 AC087633.2-202ENST00000565166 1439 ntBASIC18.33■□□□□ 0.53
TUBA1CQ9BQE3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TUBA1CQ9BQE3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.33■□□□□ 0.53
TUBA1CQ9BQE3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TUBA1CQ9BQE3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TUBA1CQ9BQE3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.33■□□□□ 0.52
TUBA1CQ9BQE3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
TUBA1CQ9BQE3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TUBA1CQ9BQE3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.33■□□□□ 0.52
TUBA1CQ9BQE3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TUBA1CQ9BQE3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.33■□□□□ 0.52
TUBA1CQ9BQE3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.33■□□□□ 0.52
TUBA1CQ9BQE3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TUBA1CQ9BQE3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TUBA1CQ9BQE3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.33■□□□□ 0.52
TUBA1CQ9BQE3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TUBA1CQ9BQE3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TUBA1CQ9BQE3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.33■□□□□ 0.52
TUBA1CQ9BQE3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.33■□□□□ 0.52
TUBA1CQ9BQE3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TUBA1CQ9BQE3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TUBA1CQ9BQE3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBA1CQ9BQE3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBA1CQ9BQE3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms