Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FOXRED1Q96CU9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXRED1Q96CU9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXRED1Q96CU9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.91■□□□□ 0.3
FOXRED1Q96CU9 AC090192.1-201ENST00000517740 490 ntBASIC16.91■□□□□ 0.3
FOXRED1Q96CU9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.91■□□□□ 0.3
FOXRED1Q96CU9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.91■□□□□ 0.3
FOXRED1Q96CU9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.91■□□□□ 0.3
FOXRED1Q96CU9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
FOXRED1Q96CU9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FOXRED1Q96CU9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
FOXRED1Q96CU9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXRED1Q96CU9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXRED1Q96CU9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
FOXRED1Q96CU9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXRED1Q96CU9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 DUX4L16-201ENST00000555130 1264 ntBASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXRED1Q96CU9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.89■□□□□ 0.3
FOXRED1Q96CU9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
FOXRED1Q96CU9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
FOXRED1Q96CU9 LETM1P2-201ENST00000597330 2178 ntBASIC16.89■□□□□ 0.3
FOXRED1Q96CU9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
FOXRED1Q96CU9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXRED1Q96CU9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.89■□□□□ 0.29
FOXRED1Q96CU9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
FOXRED1Q96CU9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FOXRED1Q96CU9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
FOXRED1Q96CU9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.89■□□□□ 0.29
FOXRED1Q96CU9 CDCA4P2-201ENST00000441182 718 ntBASIC16.89■□□□□ 0.29
FOXRED1Q96CU9 AC006970.2-201ENST00000450065 779 ntBASIC16.89■□□□□ 0.29
FOXRED1Q96CU9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.89■□□□□ 0.29
FOXRED1Q96CU9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FOXRED1Q96CU9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXRED1Q96CU9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.89■□□□□ 0.29
FOXRED1Q96CU9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXRED1Q96CU9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXRED1Q96CU9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXRED1Q96CU9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXRED1Q96CU9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXRED1Q96CU9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXRED1Q96CU9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXRED1Q96CU9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FOXRED1Q96CU9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms