Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.81■■□□□ 1.08
ATP6V0A1Q93050 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATP6V0A1Q93050 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATP6V0A1Q93050 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATP6V0A1Q93050 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.81■■□□□ 1.08
ATP6V0A1Q93050 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ATP6V0A1Q93050 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATP6V0A1Q93050 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 MESTP1-201ENST00000404287 994 ntBASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 AC026271.3-201ENST00000571884 352 ntBASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 AC112907.3-201ENST00000577781 2400 ntBASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V0A1Q93050 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 AC113347.1-201ENST00000413321 391 ntBASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 AL049597.2-201ENST00000565575 961 ntBASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V0A1Q93050 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.78■■□□□ 1.08
ATP6V0A1Q93050 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
ATP6V0A1Q93050 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.78■■□□□ 1.08
ATP6V0A1Q93050 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V0A1Q93050 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V0A1Q93050 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
ATP6V0A1Q93050 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.78■■□□□ 1.08
ATP6V0A1Q93050 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
ATP6V0A1Q93050 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.78■■□□□ 1.08
ATP6V0A1Q93050 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.78■■□□□ 1.08
ATP6V0A1Q93050 HLA-A-209ENST00000638375 975 ntBASIC21.78■■□□□ 1.08
ATP6V0A1Q93050 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
ATP6V0A1Q93050 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V0A1Q93050 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V0A1Q93050 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V0A1Q93050 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V0A1Q93050 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V0A1Q93050 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V0A1Q93050 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.77■■□□□ 1.08
ATP6V0A1Q93050 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
ATP6V0A1Q93050 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.77■■□□□ 1.08
ATP6V0A1Q93050 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP6V0A1Q93050 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP6V0A1Q93050 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.77■■□□□ 1.08
ATP6V0A1Q93050 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.77■■□□□ 1.08
ATP6V0A1Q93050 KRT18P57-201ENST00000443599 1254 ntBASIC21.77■■□□□ 1.08
ATP6V0A1Q93050 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.77■■□□□ 1.08
ATP6V0A1Q93050 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.77■■□□□ 1.08
ATP6V0A1Q93050 B3GAT3P1-201ENST00000471720 806 ntBASIC21.77■■□□□ 1.08
ATP6V0A1Q93050 KRT18P35-201ENST00000510488 1269 ntBASIC21.77■■□□□ 1.08
ATP6V0A1Q93050 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.77■■□□□ 1.08
ATP6V0A1Q93050 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.77■■□□□ 1.08
ATP6V0A1Q93050 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.77■■□□□ 1.08
ATP6V0A1Q93050 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.77■■□□□ 1.08
ATP6V0A1Q93050 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.77■■□□□ 1.08
ATP6V0A1Q93050 AC131212.4-201ENST00000623606 975 ntBASIC21.77■■□□□ 1.08
ATP6V0A1Q93050 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATP6V0A1Q93050 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
ATP6V0A1Q93050 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A1Q93050 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A1Q93050 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A1Q93050 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A1Q93050 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V0A1Q93050 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms