Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 AC135279.3-201ENST00000610945 1311 ntBASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM4Q8WVI0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 FZD10-202ENST00000539839 3282 ntBASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 AL512353.2-201ENST00000448759 1962 ntBASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
SMIM4Q8WVI0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SMIM4Q8WVI0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
SMIM4Q8WVI0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SMIM4Q8WVI0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 KRT18P20-201ENST00000548986 1279 ntBASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 AL354811.1-201ENST00000610286 706 ntBASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM4Q8WVI0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 AP001160.3-201ENST00000601484 763 ntBASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SMIM4Q8WVI0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM4Q8WVI0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SMIM4Q8WVI0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SMIM4Q8WVI0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.62■□□□□ 0.25
SMIM4Q8WVI0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.62■□□□□ 0.25
SMIM4Q8WVI0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
SMIM4Q8WVI0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms