Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 AL450487.1-201ENST00000426799 995 ntBASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 DUSP5P1-201ENST00000441325 1139 ntBASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 HCG4P8-203ENST00000443049 980 ntBASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 LINC01465-201ENST00000408887 1940 ntBASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCSK9Q8NBP7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.52■■□□□ 1.04
PCSK9Q8NBP7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
PCSK9Q8NBP7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PCSK9Q8NBP7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCSK9Q8NBP7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCSK9Q8NBP7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PCSK9Q8NBP7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.52■■□□□ 1.04
PCSK9Q8NBP7 KRT18P38-201ENST00000449496 1282 ntBASIC21.52■■□□□ 1.04
PCSK9Q8NBP7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.52■■□□□ 1.04
PCSK9Q8NBP7 VENTXP5-201ENST00000523979 775 ntBASIC21.52■■□□□ 1.04
PCSK9Q8NBP7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.52■■□□□ 1.04
PCSK9Q8NBP7 NEK4P2-201ENST00000580004 1012 ntBASIC21.52■■□□□ 1.04
PCSK9Q8NBP7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.52■■□□□ 1.04
PCSK9Q8NBP7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PCSK9Q8NBP7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.52■■□□□ 1.04
PCSK9Q8NBP7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCSK9Q8NBP7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.52■■□□□ 1.04
PCSK9Q8NBP7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCSK9Q8NBP7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
PCSK9Q8NBP7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.51■■□□□ 1.03
PCSK9Q8NBP7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCSK9Q8NBP7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.49■■□□□ 1.03
PCSK9Q8NBP7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCSK9Q8NBP7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.49■■□□□ 1.03
PCSK9Q8NBP7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PCSK9Q8NBP7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCSK9Q8NBP7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCSK9Q8NBP7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCSK9Q8NBP7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms