Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 LSM12P1-201ENST00000411836 588 ntBASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 AC026271.2-201ENST00000428091 497 ntBASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCNYL1Q8N7R7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 AC005181.1-201ENST00000604782 1256 ntBASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CCNYL1Q8N7R7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNYL1Q8N7R7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.18■□□□□ 0.66
CCNYL1Q8N7R7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.18■□□□□ 0.66
CCNYL1Q8N7R7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCNYL1Q8N7R7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.18■□□□□ 0.66
CCNYL1Q8N7R7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.18■□□□□ 0.66
CCNYL1Q8N7R7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNYL1Q8N7R7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCNYL1Q8N7R7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNYL1Q8N7R7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCNYL1Q8N7R7 AL512625.2-201ENST00000417533 625 ntBASIC19.18■□□□□ 0.66
CCNYL1Q8N7R7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CCNYL1Q8N7R7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCNYL1Q8N7R7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.18■□□□□ 0.66
CCNYL1Q8N7R7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.18■□□□□ 0.66
CCNYL1Q8N7R7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.18■□□□□ 0.66
CCNYL1Q8N7R7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNYL1Q8N7R7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.18■□□□□ 0.66
CCNYL1Q8N7R7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCNYL1Q8N7R7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 RARRES2P6-201ENST00000567333 442 ntBASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.17■□□□□ 0.66
CCNYL1Q8N7R7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms