Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 KRT8P36-201ENST00000489121 1440 ntBASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 AL355472.2-201ENST00000422958 438 ntBASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 AC091917.2-201ENST00000505002 744 ntBASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFCAB3Q8N7B9 AC010980.2-201ENST00000587099 1412 ntBASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFCAB3Q8N7B9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 CYP2T3P-201ENST00000601990 817 ntBASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
EFCAB3Q8N7B9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EFCAB3Q8N7B9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms