Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CROCCP3Q8IVE0 AL356309.3-201ENST00000624132 1934 ntBASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 AC005224.4-201ENST00000583262 1652 ntBASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 SERBP1P1-201ENST00000396021 1160 ntBASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CROCCP3Q8IVE0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 AC006333.2-201ENST00000607957 2099 ntBASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 KRT16P3-201ENST00000439127 1283 ntBASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CROCCP3Q8IVE0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 EEF1DP3-203ENST00000566025 782 ntBASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 AC133561.4-201ENST00000566112 224 ntBASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 MIR3621-201ENST00000580529 85 ntBASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CROCCP3Q8IVE0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CROCCP3Q8IVE0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms