Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VRK2Q86Y07 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
VRK2Q86Y07 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
VRK2Q86Y07 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VRK2Q86Y07 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VRK2Q86Y07 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
VRK2Q86Y07 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VRK2Q86Y07 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VRK2Q86Y07 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
VRK2Q86Y07 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
VRK2Q86Y07 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.98■□□□□ 0.47
VRK2Q86Y07 AL020996.1-203ENST00000536896 2307 ntBASIC17.98■□□□□ 0.47
VRK2Q86Y07 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
VRK2Q86Y07 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VRK2Q86Y07 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.98■□□□□ 0.47
VRK2Q86Y07 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.98■□□□□ 0.47
VRK2Q86Y07 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.98■□□□□ 0.47
VRK2Q86Y07 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.98■□□□□ 0.47
VRK2Q86Y07 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VRK2Q86Y07 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.98■□□□□ 0.47
VRK2Q86Y07 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VRK2Q86Y07 SOX15-203ENST00000570788 1093 ntBASIC17.98■□□□□ 0.47
VRK2Q86Y07 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.98■□□□□ 0.47
VRK2Q86Y07 AC120498.8-201ENST00000614275 531 ntBASIC17.98■□□□□ 0.47
VRK2Q86Y07 AL121906.2-201ENST00000621597 723 ntBASIC17.98■□□□□ 0.47
VRK2Q86Y07 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
VRK2Q86Y07 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VRK2Q86Y07 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VRK2Q86Y07 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VRK2Q86Y07 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VRK2Q86Y07 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VRK2Q86Y07 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.98■□□□□ 0.47
VRK2Q86Y07 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.98■□□□□ 0.47
VRK2Q86Y07 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VRK2Q86Y07 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.98■□□□□ 0.47
VRK2Q86Y07 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VRK2Q86Y07 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
VRK2Q86Y07 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
VRK2Q86Y07 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.97■□□□□ 0.47
VRK2Q86Y07 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VRK2Q86Y07 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
VRK2Q86Y07 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VRK2Q86Y07 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VRK2Q86Y07 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
VRK2Q86Y07 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VRK2Q86Y07 RNF165-205ENST00000588679 2904 ntBASIC17.97■□□□□ 0.47
VRK2Q86Y07 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VRK2Q86Y07 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
VRK2Q86Y07 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VRK2Q86Y07 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.97■□□□□ 0.47
VRK2Q86Y07 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VRK2Q86Y07 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VRK2Q86Y07 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.97■□□□□ 0.47
VRK2Q86Y07 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
VRK2Q86Y07 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VRK2Q86Y07 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.97■□□□□ 0.47
VRK2Q86Y07 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.97■□□□□ 0.47
VRK2Q86Y07 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.97■□□□□ 0.47
VRK2Q86Y07 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
VRK2Q86Y07 AC142086.2-201ENST00000569753 217 ntBASIC17.97■□□□□ 0.47
VRK2Q86Y07 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.97■□□□□ 0.47
VRK2Q86Y07 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
VRK2Q86Y07 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VRK2Q86Y07 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.97■□□□□ 0.47
VRK2Q86Y07 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VRK2Q86Y07 AP006587.1-201ENST00000534129 1502 ntBASIC17.97■□□□□ 0.47
VRK2Q86Y07 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VRK2Q86Y07 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VRK2Q86Y07 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.97■□□□□ 0.47
VRK2Q86Y07 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VRK2Q86Y07 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VRK2Q86Y07 AC004408.2-201ENST00000623613 2777 ntBASIC17.96■□□□□ 0.47
VRK2Q86Y07 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
VRK2Q86Y07 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK2Q86Y07 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
VRK2Q86Y07 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.96■□□□□ 0.47
VRK2Q86Y07 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK2Q86Y07 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK2Q86Y07 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK2Q86Y07 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.96■□□□□ 0.47
VRK2Q86Y07 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK2Q86Y07 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK2Q86Y07 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK2Q86Y07 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.96■□□□□ 0.47
VRK2Q86Y07 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.96■□□□□ 0.47
VRK2Q86Y07 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
VRK2Q86Y07 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.96■□□□□ 0.47
VRK2Q86Y07 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
VRK2Q86Y07 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.96■□□□□ 0.47
VRK2Q86Y07 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK2Q86Y07 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK2Q86Y07 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK2Q86Y07 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK2Q86Y07 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VRK2Q86Y07 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
VRK2Q86Y07 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK2Q86Y07 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.96■□□□□ 0.46
VRK2Q86Y07 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.95■□□□□ 0.46
VRK2Q86Y07 ZNF815P-204ENST00000434898 1737 ntBASIC17.95■□□□□ 0.46
VRK2Q86Y07 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms