Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF550Q7Z398 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF550Q7Z398 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ZNF550Q7Z398 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF550Q7Z398 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ZNF550Q7Z398 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF550Q7Z398 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.91■□□□□ 0.46
ZNF550Q7Z398 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF550Q7Z398 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF550Q7Z398 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.91■□□□□ 0.46
ZNF550Q7Z398 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.91■□□□□ 0.46
ZNF550Q7Z398 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.91■□□□□ 0.46
ZNF550Q7Z398 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ZNF550Q7Z398 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ZNF550Q7Z398 AP006587.1-201ENST00000534129 1502 ntBASIC17.91■□□□□ 0.46
ZNF550Q7Z398 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ZNF550Q7Z398 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.91■□□□□ 0.46
ZNF550Q7Z398 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.91■□□□□ 0.46
ZNF550Q7Z398 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF550Q7Z398 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZNF550Q7Z398 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 GCSHP5-201ENST00000443090 522 ntBASIC17.9■□□□□ 0.46
ZNF550Q7Z398 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 AC142381.4-202ENST00000563973 229 ntBASIC17.9■□□□□ 0.46
ZNF550Q7Z398 SOX15-203ENST00000570788 1093 ntBASIC17.9■□□□□ 0.46
ZNF550Q7Z398 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 Z82202.1-201ENST00000623446 1880 ntBASIC17.9■□□□□ 0.46
ZNF550Q7Z398 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZNF550Q7Z398 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ZNF550Q7Z398 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.89■□□□□ 0.46
ZNF550Q7Z398 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ZNF550Q7Z398 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ZNF550Q7Z398 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
ZNF550Q7Z398 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 YBX1P10-201ENST00000444752 975 ntBASIC17.89■□□□□ 0.45
ZNF550Q7Z398 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 AC008403.3-201ENST00000598924 454 ntBASIC17.89■□□□□ 0.45
ZNF550Q7Z398 AL121829.2-201ENST00000620908 328 ntBASIC17.89■□□□□ 0.45
ZNF550Q7Z398 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ZNF550Q7Z398 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF550Q7Z398 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms