Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 OR2A1-AS1-204ENST00000470435 602 ntBASIC10.48□□□□□ -0.73
LCA10Q71F78 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC10.48□□□□□ -0.73
LCA10Q71F78 AC092171.4-201ENST00000609130 632 ntBASIC10.48□□□□□ -0.73
LCA10Q71F78 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC10.48□□□□□ -0.73
LCA10Q71F78 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
LCA10Q71F78 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC10.48□□□□□ -0.73
LCA10Q71F78 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC10.48□□□□□ -0.73
LCA10Q71F78 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LCA10Q71F78 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
LCA10Q71F78 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
LCA10Q71F78 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
LCA10Q71F78 AL049796.1-201ENST00000565336 1766 ntBASIC10.47□□□□□ -0.73
LCA10Q71F78 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
LCA10Q71F78 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC10.47□□□□□ -0.73
LCA10Q71F78 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 LBX2-AS1-202ENST00000603175 2083 ntBASIC10.47□□□□□ -0.73
LCA10Q71F78 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC10.47□□□□□ -0.73
LCA10Q71F78 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC10.47□□□□□ -0.73
LCA10Q71F78 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC10.47□□□□□ -0.73
LCA10Q71F78 AC010525.1-201ENST00000585559 441 ntBASIC10.47□□□□□ -0.73
LCA10Q71F78 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC10.47□□□□□ -0.73
LCA10Q71F78 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC10.47□□□□□ -0.73
LCA10Q71F78 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
LCA10Q71F78 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC10.47□□□□□ -0.73
LCA10Q71F78 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 AP004607.7-201ENST00000527152 1677 ntBASIC10.47□□□□□ -0.73
LCA10Q71F78 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LCA10Q71F78 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
LCA10Q71F78 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
LCA10Q71F78 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC10.47□□□□□ -0.73
LCA10Q71F78 AC003102.1-202ENST00000563394 1796 ntBASIC10.47□□□□□ -0.73
LCA10Q71F78 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
LCA10Q71F78 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC10.47□□□□□ -0.73
LCA10Q71F78 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
LCA10Q71F78 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
LCA10Q71F78 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LCA10Q71F78 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LCA10Q71F78 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LCA10Q71F78 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LCA10Q71F78 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LCA10Q71F78 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC10.46□□□□□ -0.73
LCA10Q71F78 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC10.46□□□□□ -0.73
LCA10Q71F78 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC10.46□□□□□ -0.73
LCA10Q71F78 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LCA10Q71F78 AC009113.1-201ENST00000570267 2443 ntBASIC10.46□□□□□ -0.73
LCA10Q71F78 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
LCA10Q71F78 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
LCA10Q71F78 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LCA10Q71F78 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LCA10Q71F78 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LCA10Q71F78 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
LCA10Q71F78 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
LCA10Q71F78 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms