Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCNI2Q6ZMN8 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.58■□□□□ 0.89
CCNI2Q6ZMN8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCNI2Q6ZMN8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
CCNI2Q6ZMN8 AC006058.3-201ENST00000606217 1069 ntBASIC20.58■□□□□ 0.89
CCNI2Q6ZMN8 AC083880.1-201ENST00000608266 535 ntBASIC20.58■□□□□ 0.89
CCNI2Q6ZMN8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.58■□□□□ 0.89
CCNI2Q6ZMN8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCNI2Q6ZMN8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCNI2Q6ZMN8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCNI2Q6ZMN8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCNI2Q6ZMN8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.58■□□□□ 0.88
CCNI2Q6ZMN8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CCNI2Q6ZMN8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CCNI2Q6ZMN8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCNI2Q6ZMN8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 AC009113.1-201ENST00000570267 2443 ntBASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 AL512625.2-201ENST00000417533 625 ntBASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 AC128676.1-201ENST00000454392 318 ntBASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 AC138907.5-202ENST00000569484 235 ntBASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNI2Q6ZMN8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 AC079598.2-202ENST00000546624 1451 ntBASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 AC097658.1-201ENST00000475555 843 ntBASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 MYC-209ENST00000641252 345 ntBASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNI2Q6ZMN8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 AC007322.4-201ENST00000509611 723 ntBASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCNI2Q6ZMN8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms