Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 AC007322.4-201ENST00000509611 723 ntBASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXR1Q6PIV2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 TMEM179-206ENST00000616017 1645 ntBASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 RPS2P52-201ENST00000469610 820 ntBASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 AC097658.1-201ENST00000475555 843 ntBASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 AC092118.2-201ENST00000613495 667 ntBASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
FOXR1Q6PIV2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 LINC01465-201ENST00000408887 1940 ntBASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
FOXR1Q6PIV2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 ESRRAP1-201ENST00000400596 1257 ntBASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 AC079598.2-202ENST00000546624 1451 ntBASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR1Q6PIV2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR1Q6PIV2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms