Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 AL353807.1-201ENST00000427475 662 ntBASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 AC012618.2-201ENST00000428058 849 ntBASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39BQ5VTQ0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.27■□□□□ 0.83
TTC39BQ5VTQ0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TTC39BQ5VTQ0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TTC39BQ5VTQ0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
TTC39BQ5VTQ0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 RNF165-205ENST00000588679 2904 ntBASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 TMEM179-206ENST00000616017 1645 ntBASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39BQ5VTQ0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 RPS2P4-201ENST00000476944 856 ntBASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 AP001412.1-201ENST00000608405 714 ntBASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.25■□□□□ 0.83
TTC39BQ5VTQ0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 AL691432.2-201ENST00000607222 2038 ntBASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TTC39BQ5VTQ0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms