Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNFT1Q5M7Z0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 AC099778.1-201ENST00000568593 1911 ntBASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.54■□□□□ 0.4
RNFT1Q5M7Z0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNFT1Q5M7Z0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNFT1Q5M7Z0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.53■□□□□ 0.4
RNFT1Q5M7Z0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.53■□□□□ 0.4
RNFT1Q5M7Z0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNFT1Q5M7Z0 DUX4L26-201ENST00000489078 1255 ntBASIC17.53■□□□□ 0.4
RNFT1Q5M7Z0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.53■□□□□ 0.4
RNFT1Q5M7Z0 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.53■□□□□ 0.4
RNFT1Q5M7Z0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.53■□□□□ 0.4
RNFT1Q5M7Z0 AC006011.2-201ENST00000621313 1158 ntBASIC17.53■□□□□ 0.4
RNFT1Q5M7Z0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.53■□□□□ 0.4
RNFT1Q5M7Z0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNFT1Q5M7Z0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
RNFT1Q5M7Z0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNFT1Q5M7Z0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.53■□□□□ 0.4
RNFT1Q5M7Z0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNFT1Q5M7Z0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNFT1Q5M7Z0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNFT1Q5M7Z0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNFT1Q5M7Z0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RNFT1Q5M7Z0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.52■□□□□ 0.4
RNFT1Q5M7Z0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RNFT1Q5M7Z0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RNFT1Q5M7Z0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNFT1Q5M7Z0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNFT1Q5M7Z0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNFT1Q5M7Z0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNFT1Q5M7Z0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNFT1Q5M7Z0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNFT1Q5M7Z0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RNFT1Q5M7Z0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNFT1Q5M7Z0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RNFT1Q5M7Z0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNFT1Q5M7Z0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNFT1Q5M7Z0 AC128688.1-201ENST00000487626 519 ntBASIC17.52■□□□□ 0.4
RNFT1Q5M7Z0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.52■□□□□ 0.4
RNFT1Q5M7Z0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.52■□□□□ 0.4
RNFT1Q5M7Z0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RNFT1Q5M7Z0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RNFT1Q5M7Z0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNFT1Q5M7Z0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNFT1Q5M7Z0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNFT1Q5M7Z0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNFT1Q5M7Z0 KRT8P41-201ENST00000533985 1514 ntBASIC17.52■□□□□ 0.39
RNFT1Q5M7Z0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 LIN28AP1-201ENST00000429574 405 ntBASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 AL157384.1-201ENST00000445995 2473 ntBASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 ATP5G1P1-201ENST00000448724 379 ntBASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.51■□□□□ 0.39
RNFT1Q5M7Z0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms