Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RUNDC3AQ59EK9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 ZNF815P-204ENST00000434898 1737 ntBASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.37■□□□□ 0.53
RUNDC3AQ59EK9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RUNDC3AQ59EK9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RUNDC3AQ59EK9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RUNDC3AQ59EK9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RUNDC3AQ59EK9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RUNDC3AQ59EK9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RUNDC3AQ59EK9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.36■□□□□ 0.53
RUNDC3AQ59EK9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.36■□□□□ 0.53
RUNDC3AQ59EK9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.36■□□□□ 0.53
RUNDC3AQ59EK9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RUNDC3AQ59EK9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RUNDC3AQ59EK9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 LSM12P1-201ENST00000411836 588 ntBASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RUNDC3AQ59EK9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RUNDC3AQ59EK9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RUNDC3AQ59EK9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RUNDC3AQ59EK9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.34■□□□□ 0.53
RUNDC3AQ59EK9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RUNDC3AQ59EK9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RUNDC3AQ59EK9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RUNDC3AQ59EK9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RUNDC3AQ59EK9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.34■□□□□ 0.53
RUNDC3AQ59EK9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RUNDC3AQ59EK9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RUNDC3AQ59EK9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RUNDC3AQ59EK9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RUNDC3AQ59EK9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RUNDC3AQ59EK9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RUNDC3AQ59EK9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.34■□□□□ 0.53
RUNDC3AQ59EK9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.34■□□□□ 0.53
RUNDC3AQ59EK9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RUNDC3AQ59EK9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms