Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PDE6CP51160 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6CP51160 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.02■□□□□ 0.96
PDE6CP51160 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6CP51160 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.02■□□□□ 0.96
PDE6CP51160 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
PDE6CP51160 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
PDE6CP51160 MTDHP1-201ENST00000605323 784 ntBASIC21.02■□□□□ 0.96
PDE6CP51160 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6CP51160 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6CP51160 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6CP51160 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6CP51160 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6CP51160 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.02■□□□□ 0.96
PDE6CP51160 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.02■□□□□ 0.95
PDE6CP51160 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6CP51160 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6CP51160 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PDE6CP51160 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
PDE6CP51160 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6CP51160 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6CP51160 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6CP51160 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6CP51160 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.01■□□□□ 0.95
PDE6CP51160 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6CP51160 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6CP51160 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.01■□□□□ 0.95
PDE6CP51160 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.01■□□□□ 0.95
PDE6CP51160 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.01■□□□□ 0.95
PDE6CP51160 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6CP51160 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PDE6CP51160 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.01■□□□□ 0.95
PDE6CP51160 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
PDE6CP51160 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.01■□□□□ 0.95
PDE6CP51160 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PDE6CP51160 AC124283.5-201ENST00000624661 1809 ntBASIC21.01■□□□□ 0.95
PDE6CP51160 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6CP51160 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.01■□□□□ 0.95
PDE6CP51160 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
PDE6CP51160 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6CP51160 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
PDE6CP51160 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6CP51160 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PDE6CP51160 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.01■□□□□ 0.95
PDE6CP51160 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.01■□□□□ 0.95
PDE6CP51160 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PDE6CP51160 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDE6CP51160 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PDE6CP51160 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
PDE6CP51160 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
PDE6CP51160 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDE6CP51160 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PDE6CP51160 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDE6CP51160 AC239809.2-201ENST00000415381 517 ntBASIC21■□□□□ 0.95
PDE6CP51160 AC133681.1-201ENST00000465482 601 ntBASIC21■□□□□ 0.95
PDE6CP51160 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21■□□□□ 0.95
PDE6CP51160 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PDE6CP51160 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21■□□□□ 0.95
PDE6CP51160 PRKY-204ENST00000533551 1019 ntBASIC21■□□□□ 0.95
PDE6CP51160 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21■□□□□ 0.95
PDE6CP51160 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21■□□□□ 0.95
PDE6CP51160 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21■□□□□ 0.95
PDE6CP51160 TFP1-202ENST00000475455 1573 ntBASIC21■□□□□ 0.95
PDE6CP51160 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDE6CP51160 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PDE6CP51160 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21■□□□□ 0.95
PDE6CP51160 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PDE6CP51160 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6CP51160 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6CP51160 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PDE6CP51160 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PDE6CP51160 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6CP51160 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6CP51160 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6CP51160 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6CP51160 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6CP51160 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
PDE6CP51160 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.99■□□□□ 0.95
PDE6CP51160 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.99■□□□□ 0.95
PDE6CP51160 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.99■□□□□ 0.95
PDE6CP51160 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6CP51160 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PDE6CP51160 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6CP51160 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6CP51160 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6CP51160 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6CP51160 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6CP51160 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.99■□□□□ 0.95
PDE6CP51160 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6CP51160 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6CP51160 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6CP51160 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.98■□□□□ 0.95
PDE6CP51160 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6CP51160 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.98■□□□□ 0.95
PDE6CP51160 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
PDE6CP51160 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PDE6CP51160 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6CP51160 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6CP51160 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6CP51160 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms