Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A12P48065 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.8■□□□□ 0.6
SLC6A12P48065 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A12P48065 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A12P48065 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SLC6A12P48065 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SLC6A12P48065 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A12P48065 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.8■□□□□ 0.6
SLC6A12P48065 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.8■□□□□ 0.6
SLC6A12P48065 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A12P48065 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC6A12P48065 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SLC6A12P48065 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A12P48065 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A12P48065 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A12P48065 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A12P48065 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A12P48065 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A12P48065 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SLC6A12P48065 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC6A12P48065 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SLC6A12P48065 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC6A12P48065 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SLC6A12P48065 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SLC6A12P48065 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC6A12P48065 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SLC6A12P48065 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A12P48065 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC6A12P48065 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A12P48065 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLC6A12P48065 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A12P48065 AC018445.3-201ENST00000624177 1945 ntBASIC18.79■□□□□ 0.6
SLC6A12P48065 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A12P48065 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC6A12P48065 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC6A12P48065 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC6A12P48065 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC6A12P48065 CD99P1-205ENST00000527459 561 ntBASIC18.79■□□□□ 0.6
SLC6A12P48065 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC6A12P48065 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A12P48065 SDHAP1-207ENST00000440850 2000 ntBASIC18.79■□□□□ 0.6
SLC6A12P48065 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A12P48065 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SLC6A12P48065 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.79■□□□□ 0.6
SLC6A12P48065 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC6A12P48065 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC6A12P48065 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SLC6A12P48065 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC6A12P48065 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A12P48065 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A12P48065 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A12P48065 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SLC6A12P48065 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A12P48065 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A12P48065 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A12P48065 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC6A12P48065 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC6A12P48065 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC6A12P48065 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC6A12P48065 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC6A12P48065 MIR4651-201ENST00000582622 73 ntBASIC18.78■□□□□ 0.6
SLC6A12P48065 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A12P48065 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A12P48065 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A12P48065 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SLC6A12P48065 TEX21P-204ENST00000641479 1693 ntBASIC18.78■□□□□ 0.6
SLC6A12P48065 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A12P48065 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A12P48065 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A12P48065 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A12P48065 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC6A12P48065 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A12P48065 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SLC6A12P48065 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC6A12P48065 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC6A12P48065 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC6A12P48065 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SLC6A12P48065 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC6A12P48065 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC6A12P48065 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SLC6A12P48065 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.77■□□□□ 0.6
SLC6A12P48065 C1QL1P1-201ENST00000568105 661 ntBASIC18.77■□□□□ 0.6
SLC6A12P48065 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC6A12P48065 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC6A12P48065 AL023875.1-201ENST00000640777 796 ntBASIC18.77■□□□□ 0.6
SLC6A12P48065 AC073648.6-201ENST00000641589 218 ntBASIC18.77■□□□□ 0.6
SLC6A12P48065 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC6A12P48065 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC6A12P48065 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
SLC6A12P48065 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC6A12P48065 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC6A12P48065 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC6A12P48065 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC6A12P48065 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
SLC6A12P48065 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC6A12P48065 AC141586.3-201ENST00000562166 1838 ntBASIC18.77■□□□□ 0.59
SLC6A12P48065 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A12P48065 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC6A12P48065 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A12P48065 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms