Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTSKP43235 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTSKP43235 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTSKP43235 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTSKP43235 KRT16P6-202ENST00000425692 1426 ntBASIC19.37■□□□□ 0.69
CTSKP43235 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTSKP43235 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CTSKP43235 AC004980.1-204ENST00000429707 299 ntBASIC19.37■□□□□ 0.69
CTSKP43235 DUX4L26-201ENST00000489078 1255 ntBASIC19.37■□□□□ 0.69
CTSKP43235 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.37■□□□□ 0.69
CTSKP43235 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTSKP43235 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.37■□□□□ 0.69
CTSKP43235 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTSKP43235 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTSKP43235 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.37■□□□□ 0.69
CTSKP43235 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTSKP43235 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CTSKP43235 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CTSKP43235 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.37■□□□□ 0.69
CTSKP43235 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTSKP43235 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTSKP43235 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.36■□□□□ 0.69
CTSKP43235 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CTSKP43235 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTSKP43235 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTSKP43235 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.36■□□□□ 0.69
CTSKP43235 AC018553.1-201ENST00000616682 1458 ntBASIC19.36■□□□□ 0.69
CTSKP43235 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.36■□□□□ 0.69
CTSKP43235 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.36■□□□□ 0.69
CTSKP43235 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CTSKP43235 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTSKP43235 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTSKP43235 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CTSKP43235 TSPY14P-201ENST00000303979 915 ntBASIC19.36■□□□□ 0.69
CTSKP43235 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
CTSKP43235 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.36■□□□□ 0.69
CTSKP43235 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.36■□□□□ 0.69
CTSKP43235 TUBB8P6-201ENST00000436895 1288 ntBASIC19.36■□□□□ 0.69
CTSKP43235 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
CTSKP43235 EGLN1P1-201ENST00000531623 762 ntBASIC19.36■□□□□ 0.69
CTSKP43235 AC010203.1-204ENST00000548782 407 ntBASIC19.36■□□□□ 0.69
CTSKP43235 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTSKP43235 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTSKP43235 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CTSKP43235 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTSKP43235 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CTSKP43235 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CTSKP43235 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTSKP43235 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTSKP43235 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTSKP43235 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTSKP43235 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTSKP43235 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.35■□□□□ 0.69
CTSKP43235 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTSKP43235 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.35■□□□□ 0.69
CTSKP43235 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CTSKP43235 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.35■□□□□ 0.69
CTSKP43235 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTSKP43235 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CTSKP43235 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.35■□□□□ 0.69
CTSKP43235 AC131212.4-201ENST00000623606 975 ntBASIC19.35■□□□□ 0.69
CTSKP43235 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.35■□□□□ 0.69
CTSKP43235 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTSKP43235 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CTSKP43235 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTSKP43235 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CTSKP43235 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.35■□□□□ 0.69
CTSKP43235 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTSKP43235 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CTSKP43235 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.35■□□□□ 0.69
CTSKP43235 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTSKP43235 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.34■□□□□ 0.69
CTSKP43235 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CTSKP43235 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSKP43235 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSKP43235 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSKP43235 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.34■□□□□ 0.69
CTSKP43235 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSKP43235 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSKP43235 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTSKP43235 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSKP43235 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSKP43235 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSKP43235 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CTSKP43235 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTSKP43235 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSKP43235 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.34■□□□□ 0.69
CTSKP43235 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.34■□□□□ 0.69
CTSKP43235 AC097488.1-201ENST00000507834 756 ntBASIC19.34■□□□□ 0.69
CTSKP43235 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTSKP43235 NTF6B-201ENST00000591913 560 ntBASIC19.34■□□□□ 0.69
CTSKP43235 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CTSKP43235 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.34■□□□□ 0.69
CTSKP43235 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTSKP43235 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTSKP43235 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSKP43235 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
CTSKP43235 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CTSKP43235 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSKP43235 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms