Protein–RNA interactions for Protein: P42263

GRIA3, Glutamate receptor 3, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3P42263 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GRIA3P42263 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.15■□□□□ 0.66
GRIA3P42263 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GRIA3P42263 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GRIA3P42263 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GRIA3P42263 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GRIA3P42263 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GRIA3P42263 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.15■□□□□ 0.66
GRIA3P42263 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GRIA3P42263 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.15■□□□□ 0.66
GRIA3P42263 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.15■□□□□ 0.66
GRIA3P42263 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GRIA3P42263 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
GRIA3P42263 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GRIA3P42263 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GRIA3P42263 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
GRIA3P42263 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
GRIA3P42263 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.15■□□□□ 0.66
GRIA3P42263 KRT16P6-202ENST00000425692 1426 ntBASIC19.15■□□□□ 0.66
GRIA3P42263 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.15■□□□□ 0.66
GRIA3P42263 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
GRIA3P42263 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.15■□□□□ 0.66
GRIA3P42263 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GRIA3P42263 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.15■□□□□ 0.66
GRIA3P42263 BX119927.1-201ENST00000636596 1552 ntBASIC19.15■□□□□ 0.66
GRIA3P42263 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.14■□□□□ 0.66
GRIA3P42263 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GRIA3P42263 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
GRIA3P42263 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GRIA3P42263 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
GRIA3P42263 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
GRIA3P42263 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GRIA3P42263 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.14■□□□□ 0.65
GRIA3P42263 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.14■□□□□ 0.65
GRIA3P42263 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
GRIA3P42263 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
GRIA3P42263 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.14■□□□□ 0.65
GRIA3P42263 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.14■□□□□ 0.65
GRIA3P42263 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.14■□□□□ 0.65
GRIA3P42263 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.14■□□□□ 0.65
GRIA3P42263 AC069544.1-201ENST00000609399 999 ntBASIC19.14■□□□□ 0.65
GRIA3P42263 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GRIA3P42263 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GRIA3P42263 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.14■□□□□ 0.65
GRIA3P42263 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GRIA3P42263 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.14■□□□□ 0.65
GRIA3P42263 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.14■□□□□ 0.65
GRIA3P42263 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GRIA3P42263 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.14■□□□□ 0.65
GRIA3P42263 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GRIA3P42263 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
GRIA3P42263 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
GRIA3P42263 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
GRIA3P42263 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.13■□□□□ 0.65
GRIA3P42263 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
GRIA3P42263 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.13■□□□□ 0.65
GRIA3P42263 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GRIA3P42263 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.13■□□□□ 0.65
GRIA3P42263 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.13■□□□□ 0.65
GRIA3P42263 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
GRIA3P42263 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GRIA3P42263 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GRIA3P42263 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.13■□□□□ 0.65
GRIA3P42263 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.13■□□□□ 0.65
GRIA3P42263 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GRIA3P42263 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
GRIA3P42263 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.13■□□□□ 0.65
GRIA3P42263 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GRIA3P42263 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
GRIA3P42263 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.13■□□□□ 0.65
GRIA3P42263 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.13■□□□□ 0.65
GRIA3P42263 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GRIA3P42263 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GRIA3P42263 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GRIA3P42263 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.13■□□□□ 0.65
GRIA3P42263 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GRIA3P42263 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GRIA3P42263 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
GRIA3P42263 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
GRIA3P42263 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
GRIA3P42263 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA3P42263 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA3P42263 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA3P42263 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
GRIA3P42263 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA3P42263 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA3P42263 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA3P42263 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA3P42263 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.12■□□□□ 0.65
GRIA3P42263 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA3P42263 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA3P42263 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA3P42263 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
GRIA3P42263 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA3P42263 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
GRIA3P42263 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GRIA3P42263 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
GRIA3P42263 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.12■□□□□ 0.65
GRIA3P42263 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
GRIA3P42263 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms