Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.45■□□□□ 0.22
COL8A2P25067 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.45■□□□□ 0.22
COL8A2P25067 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.45■□□□□ 0.22
COL8A2P25067 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.45■□□□□ 0.22
COL8A2P25067 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.45■□□□□ 0.22
COL8A2P25067 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.45■□□□□ 0.22
COL8A2P25067 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COL8A2P25067 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.45■□□□□ 0.22
COL8A2P25067 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 AC099778.1-201ENST00000568593 1911 ntBASIC16.45■□□□□ 0.22
COL8A2P25067 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.45■□□□□ 0.22
COL8A2P25067 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL8A2P25067 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL8A2P25067 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL8A2P25067 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL8A2P25067 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL8A2P25067 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
COL8A2P25067 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL8A2P25067 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL8A2P25067 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL8A2P25067 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.44■□□□□ 0.22
COL8A2P25067 AP000525.1-201ENST00000608286 694 ntBASIC16.44■□□□□ 0.22
COL8A2P25067 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.44■□□□□ 0.22
COL8A2P25067 AC131212.4-201ENST00000623606 975 ntBASIC16.44■□□□□ 0.22
COL8A2P25067 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL8A2P25067 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.44■□□□□ 0.22
COL8A2P25067 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL8A2P25067 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.44■□□□□ 0.22
COL8A2P25067 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL8A2P25067 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL8A2P25067 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL8A2P25067 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL8A2P25067 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL8A2P25067 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL8A2P25067 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL8A2P25067 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL8A2P25067 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
COL8A2P25067 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL8A2P25067 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL8A2P25067 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.43■□□□□ 0.22
COL8A2P25067 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL8A2P25067 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL8A2P25067 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.43■□□□□ 0.22
COL8A2P25067 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL8A2P25067 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.43■□□□□ 0.22
COL8A2P25067 MIR1238-201ENST00000408483 83 ntBASIC16.43■□□□□ 0.22
COL8A2P25067 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL8A2P25067 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.43■□□□□ 0.22
COL8A2P25067 AC004980.1-204ENST00000429707 299 ntBASIC16.43■□□□□ 0.22
COL8A2P25067 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.43■□□□□ 0.22
COL8A2P25067 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.43■□□□□ 0.22
COL8A2P25067 HLA-A-209ENST00000638375 975 ntBASIC16.43■□□□□ 0.22
COL8A2P25067 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL8A2P25067 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL8A2P25067 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL8A2P25067 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL8A2P25067 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL8A2P25067 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL8A2P25067 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
COL8A2P25067 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL8A2P25067 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL8A2P25067 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL8A2P25067 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL8A2P25067 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
COL8A2P25067 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL8A2P25067 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.42■□□□□ 0.22
COL8A2P25067 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
COL8A2P25067 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL8A2P25067 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL8A2P25067 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.42■□□□□ 0.22
COL8A2P25067 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL8A2P25067 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL8A2P25067 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL8A2P25067 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL8A2P25067 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL8A2P25067 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
COL8A2P25067 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL8A2P25067 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COL8A2P25067 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL8A2P25067 AC011506.1-201ENST00000474329 610 ntBASIC16.42■□□□□ 0.22
COL8A2P25067 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.42■□□□□ 0.22
COL8A2P25067 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.42■□□□□ 0.22
COL8A2P25067 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
COL8A2P25067 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
COL8A2P25067 KRT8P8-201ENST00000434750 1448 ntBASIC16.42■□□□□ 0.22
COL8A2P25067 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL8A2P25067 KRT8P9-201ENST00000558927 1449 ntBASIC16.42■□□□□ 0.22
COL8A2P25067 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.42■□□□□ 0.22
COL8A2P25067 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.42■□□□□ 0.22
COL8A2P25067 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COL8A2P25067 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms