Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 MESTP1-201ENST00000404287 994 ntBASIC21.43■■□□□ 1.02
SRGAP2CP0DJJ0 MIR1238-201ENST00000408483 83 ntBASIC21.43■■□□□ 1.02
SRGAP2CP0DJJ0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SRGAP2CP0DJJ0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.43■■□□□ 1.02
SRGAP2CP0DJJ0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SRGAP2CP0DJJ0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.43■■□□□ 1.02
SRGAP2CP0DJJ0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.43■■□□□ 1.02
SRGAP2CP0DJJ0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.43■■□□□ 1.02
SRGAP2CP0DJJ0 MIR6786-201ENST00000616843 113 ntBASIC21.43■■□□□ 1.02
SRGAP2CP0DJJ0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.43■■□□□ 1.02
SRGAP2CP0DJJ0 FSCN1P1-201ENST00000568912 1481 ntBASIC21.43■■□□□ 1.02
SRGAP2CP0DJJ0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SRGAP2CP0DJJ0 LINC01465-201ENST00000408887 1940 ntBASIC21.43■■□□□ 1.02
SRGAP2CP0DJJ0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SRGAP2CP0DJJ0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.43■■□□□ 1.02
SRGAP2CP0DJJ0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SRGAP2CP0DJJ0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SRGAP2CP0DJJ0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SRGAP2CP0DJJ0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SRGAP2CP0DJJ0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SRGAP2CP0DJJ0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SRGAP2CP0DJJ0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SRGAP2CP0DJJ0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SRGAP2CP0DJJ0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SRGAP2CP0DJJ0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.42■■□□□ 1.02
SRGAP2CP0DJJ0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.42■■□□□ 1.02
SRGAP2CP0DJJ0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SRGAP2CP0DJJ0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SRGAP2CP0DJJ0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.42■■□□□ 1.02
SRGAP2CP0DJJ0 AC026271.3-201ENST00000571884 352 ntBASIC21.42■■□□□ 1.02
SRGAP2CP0DJJ0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SRGAP2CP0DJJ0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SRGAP2CP0DJJ0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 AL390955.1-201ENST00000428694 934 ntBASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 B3GAT3P1-201ENST00000471720 806 ntBASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 LINC01023-201ENST00000606054 436 ntBASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SRGAP2CP0DJJ0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 KRT8P9-201ENST00000558927 1449 ntBASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SRGAP2CP0DJJ0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SRGAP2CP0DJJ0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SRGAP2CP0DJJ0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
SRGAP2CP0DJJ0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
SRGAP2CP0DJJ0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SRGAP2CP0DJJ0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SRGAP2CP0DJJ0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.39■■□□□ 1.01
SRGAP2CP0DJJ0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.39■■□□□ 1.01
SRGAP2CP0DJJ0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.39■■□□□ 1.01
SRGAP2CP0DJJ0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.39■■□□□ 1.01
SRGAP2CP0DJJ0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SRGAP2CP0DJJ0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SRGAP2CP0DJJ0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.39■■□□□ 1.01
SRGAP2CP0DJJ0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.39■■□□□ 1.01
SRGAP2CP0DJJ0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.39■■□□□ 1.01
SRGAP2CP0DJJ0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
SRGAP2CP0DJJ0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SRGAP2CP0DJJ0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SRGAP2CP0DJJ0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SRGAP2CP0DJJ0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.38■■□□□ 1.01
SRGAP2CP0DJJ0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.38■■□□□ 1.01
SRGAP2CP0DJJ0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms