Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 AC011270.2-201ENST00000624293 2550 ntBASIC18.78■□□□□ 0.6
LINGO3P0C6S8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.78■□□□□ 0.6
LINGO3P0C6S8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 AC231657.2-201ENST00000624556 255 ntBASIC18.77■□□□□ 0.6
LINGO3P0C6S8 AC073111.5-205ENST00000641717 521 ntBASIC18.77■□□□□ 0.6
LINGO3P0C6S8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.77■□□□□ 0.6
LINGO3P0C6S8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
LINGO3P0C6S8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.77■□□□□ 0.59
LINGO3P0C6S8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
LINGO3P0C6S8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.77■□□□□ 0.59
LINGO3P0C6S8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINGO3P0C6S8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LINGO3P0C6S8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINGO3P0C6S8 LINC01465-201ENST00000408887 1940 ntBASIC18.76■□□□□ 0.59
LINGO3P0C6S8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LINGO3P0C6S8 AC124067.4-201ENST00000519691 2379 ntBASIC18.76■□□□□ 0.59
LINGO3P0C6S8 AC007322.3-201ENST00000426526 701 ntBASIC18.76■□□□□ 0.59
LINGO3P0C6S8 CDCA4P2-201ENST00000441182 718 ntBASIC18.76■□□□□ 0.59
LINGO3P0C6S8 CDV3P1-201ENST00000471403 739 ntBASIC18.76■□□□□ 0.59
LINGO3P0C6S8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.76■□□□□ 0.59
LINGO3P0C6S8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.76■□□□□ 0.59
LINGO3P0C6S8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.76■□□□□ 0.59
LINGO3P0C6S8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINGO3P0C6S8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINGO3P0C6S8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINGO3P0C6S8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINGO3P0C6S8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINGO3P0C6S8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LINGO3P0C6S8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINGO3P0C6S8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.76■□□□□ 0.59
LINGO3P0C6S8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.76■□□□□ 0.59
LINGO3P0C6S8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 AL591742.1-201ENST00000604433 565 ntBASIC18.75■□□□□ 0.59
LINGO3P0C6S8 RAP2CP1-201ENST00000605103 478 ntBASIC18.75■□□□□ 0.59
LINGO3P0C6S8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.75■□□□□ 0.59
LINGO3P0C6S8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINGO3P0C6S8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms