Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VAPBO95292 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAPBO95292 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAPBO95292 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VAPBO95292 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
VAPBO95292 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAPBO95292 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VAPBO95292 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VAPBO95292 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.55■□□□□ 0.72
VAPBO95292 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.55■□□□□ 0.72
VAPBO95292 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
VAPBO95292 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAPBO95292 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.55■□□□□ 0.72
VAPBO95292 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAPBO95292 AP000974.1-201ENST00000623909 2387 ntBASIC19.55■□□□□ 0.72
VAPBO95292 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VAPBO95292 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.55■□□□□ 0.72
VAPBO95292 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAPBO95292 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAPBO95292 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.55■□□□□ 0.72
VAPBO95292 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.55■□□□□ 0.72
VAPBO95292 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
VAPBO95292 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAPBO95292 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAPBO95292 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAPBO95292 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAPBO95292 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VAPBO95292 AP006587.1-201ENST00000534129 1502 ntBASIC19.55■□□□□ 0.72
VAPBO95292 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VAPBO95292 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.55■□□□□ 0.72
VAPBO95292 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
VAPBO95292 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
VAPBO95292 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.54■□□□□ 0.72
VAPBO95292 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VAPBO95292 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
VAPBO95292 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
VAPBO95292 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
VAPBO95292 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VAPBO95292 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
VAPBO95292 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VAPBO95292 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VAPBO95292 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VAPBO95292 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.54■□□□□ 0.72
VAPBO95292 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VAPBO95292 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.54■□□□□ 0.72
VAPBO95292 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.54■□□□□ 0.72
VAPBO95292 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.54■□□□□ 0.72
VAPBO95292 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VAPBO95292 AC008687.6-201ENST00000596318 630 ntBASIC19.54■□□□□ 0.72
VAPBO95292 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VAPBO95292 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.54■□□□□ 0.72
VAPBO95292 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VAPBO95292 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
VAPBO95292 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.54■□□□□ 0.72
VAPBO95292 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VAPBO95292 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
VAPBO95292 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VAPBO95292 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VAPBO95292 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VAPBO95292 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VAPBO95292 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.53■□□□□ 0.72
VAPBO95292 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VAPBO95292 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VAPBO95292 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
VAPBO95292 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VAPBO95292 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VAPBO95292 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.53■□□□□ 0.72
VAPBO95292 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VAPBO95292 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.53■□□□□ 0.72
VAPBO95292 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.53■□□□□ 0.72
VAPBO95292 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
VAPBO95292 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.53■□□□□ 0.72
VAPBO95292 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
VAPBO95292 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VAPBO95292 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.53■□□□□ 0.72
VAPBO95292 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.53■□□□□ 0.72
VAPBO95292 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VAPBO95292 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
VAPBO95292 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.53■□□□□ 0.72
VAPBO95292 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
VAPBO95292 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.53■□□□□ 0.72
VAPBO95292 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.53■□□□□ 0.72
VAPBO95292 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VAPBO95292 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VAPBO95292 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VAPBO95292 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VAPBO95292 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.53■□□□□ 0.72
VAPBO95292 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VAPBO95292 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
VAPBO95292 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
VAPBO95292 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VAPBO95292 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VAPBO95292 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.52■□□□□ 0.72
VAPBO95292 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VAPBO95292 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.52■□□□□ 0.72
VAPBO95292 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VAPBO95292 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
VAPBO95292 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
VAPBO95292 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.52■□□□□ 0.72
VAPBO95292 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms