Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CSPG5O95196 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CSPG5O95196 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.89■□□□□ 0.94
CSPG5O95196 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.89■□□□□ 0.93
CSPG5O95196 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.89■□□□□ 0.93
CSPG5O95196 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.89■□□□□ 0.93
CSPG5O95196 AL031133.1-201ENST00000406807 723 ntBASIC20.89■□□□□ 0.93
CSPG5O95196 HMGA1P5-201ENST00000412453 271 ntBASIC20.89■□□□□ 0.93
CSPG5O95196 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.89■□□□□ 0.93
CSPG5O95196 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.89■□□□□ 0.93
CSPG5O95196 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CSPG5O95196 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.89■□□□□ 0.93
CSPG5O95196 KRT18P16-201ENST00000510337 1294 ntBASIC20.89■□□□□ 0.93
CSPG5O95196 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.89■□□□□ 0.93
CSPG5O95196 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.89■□□□□ 0.93
CSPG5O95196 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CSPG5O95196 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.89■□□□□ 0.93
CSPG5O95196 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSPG5O95196 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSPG5O95196 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CSPG5O95196 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CSPG5O95196 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CSPG5O95196 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.88■□□□□ 0.93
CSPG5O95196 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.88■□□□□ 0.93
CSPG5O95196 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSPG5O95196 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CSPG5O95196 KRT16P6-202ENST00000425692 1426 ntBASIC20.88■□□□□ 0.93
CSPG5O95196 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CSPG5O95196 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSPG5O95196 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSPG5O95196 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSPG5O95196 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSPG5O95196 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSPG5O95196 RNF152P1-201ENST00000397754 604 ntBASIC20.88■□□□□ 0.93
CSPG5O95196 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSPG5O95196 FAM207BP-201ENST00000447172 505 ntBASIC20.88■□□□□ 0.93
CSPG5O95196 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
CSPG5O95196 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSPG5O95196 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.88■□□□□ 0.93
CSPG5O95196 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.88■□□□□ 0.93
CSPG5O95196 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.88■□□□□ 0.93
CSPG5O95196 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.88■□□□□ 0.93
CSPG5O95196 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.88■□□□□ 0.93
CSPG5O95196 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.88■□□□□ 0.93
CSPG5O95196 AC116562.4-202ENST00000641738 218 ntBASIC20.88■□□□□ 0.93
CSPG5O95196 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSPG5O95196 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSPG5O95196 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.88■□□□□ 0.93
CSPG5O95196 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSPG5O95196 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CSPG5O95196 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CSPG5O95196 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.88■□□□□ 0.93
CSPG5O95196 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.87■□□□□ 0.93
CSPG5O95196 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CSPG5O95196 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSPG5O95196 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSPG5O95196 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSPG5O95196 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSPG5O95196 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSPG5O95196 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSPG5O95196 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CSPG5O95196 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CSPG5O95196 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.87■□□□□ 0.93
CSPG5O95196 TPM4P1-201ENST00000436100 807 ntBASIC20.87■□□□□ 0.93
CSPG5O95196 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.87■□□□□ 0.93
CSPG5O95196 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.87■□□□□ 0.93
CSPG5O95196 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.87■□□□□ 0.93
CSPG5O95196 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.87■□□□□ 0.93
CSPG5O95196 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.87■□□□□ 0.93
CSPG5O95196 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.87■□□□□ 0.93
CSPG5O95196 HLA-A-209ENST00000638375 975 ntBASIC20.87■□□□□ 0.93
CSPG5O95196 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSPG5O95196 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSPG5O95196 SMG8-203ENST00000578922 2178 ntBASIC20.87■□□□□ 0.93
CSPG5O95196 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.87■□□□□ 0.93
CSPG5O95196 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSPG5O95196 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSPG5O95196 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CSPG5O95196 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSPG5O95196 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSPG5O95196 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.86■□□□□ 0.93
CSPG5O95196 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSPG5O95196 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSPG5O95196 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSPG5O95196 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CSPG5O95196 AC004951.3-201ENST00000418645 1148 ntBASIC20.86■□□□□ 0.93
CSPG5O95196 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CSPG5O95196 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
CSPG5O95196 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.86■□□□□ 0.93
CSPG5O95196 AL359075.1-203ENST00000462729 1002 ntBASIC20.86■□□□□ 0.93
CSPG5O95196 AC091390.4-202ENST00000476426 537 ntBASIC20.86■□□□□ 0.93
CSPG5O95196 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSPG5O95196 AP000692.2-201ENST00000608391 879 ntBASIC20.86■□□□□ 0.93
CSPG5O95196 AC130371.2-201ENST00000619443 611 ntBASIC20.86■□□□□ 0.93
CSPG5O95196 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.86■□□□□ 0.93
CSPG5O95196 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSPG5O95196 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CSPG5O95196 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSPG5O95196 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CSPG5O95196 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms