Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.68■□□□□ 0.74
USP1O94782 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP1O94782 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP1O94782 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.68■□□□□ 0.74
USP1O94782 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP1O94782 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
USP1O94782 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP1O94782 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.68■□□□□ 0.74
USP1O94782 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP1O94782 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.68■□□□□ 0.74
USP1O94782 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.68■□□□□ 0.74
USP1O94782 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.68■□□□□ 0.74
USP1O94782 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.68■□□□□ 0.74
USP1O94782 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.68■□□□□ 0.74
USP1O94782 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP1O94782 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.68■□□□□ 0.74
USP1O94782 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP1O94782 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.68■□□□□ 0.74
USP1O94782 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.68■□□□□ 0.74
USP1O94782 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.68■□□□□ 0.74
USP1O94782 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
USP1O94782 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP1O94782 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP1O94782 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP1O94782 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.68■□□□□ 0.74
USP1O94782 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP1O94782 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP1O94782 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP1O94782 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
USP1O94782 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP1O94782 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
USP1O94782 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP1O94782 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
USP1O94782 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
USP1O94782 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP1O94782 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
USP1O94782 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
USP1O94782 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.67■□□□□ 0.74
USP1O94782 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.67■□□□□ 0.74
USP1O94782 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP1O94782 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.67■□□□□ 0.74
USP1O94782 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP1O94782 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP1O94782 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.67■□□□□ 0.74
USP1O94782 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
USP1O94782 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP1O94782 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.67■□□□□ 0.74
USP1O94782 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.67■□□□□ 0.74
USP1O94782 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.67■□□□□ 0.74
USP1O94782 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.67■□□□□ 0.74
USP1O94782 MIR4758-201ENST00000577688 71 ntBASIC19.67■□□□□ 0.74
USP1O94782 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.67■□□□□ 0.74
USP1O94782 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP1O94782 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP1O94782 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP1O94782 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP1O94782 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP1O94782 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.67■□□□□ 0.74
USP1O94782 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP1O94782 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
USP1O94782 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP1O94782 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP1O94782 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP1O94782 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP1O94782 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP1O94782 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP1O94782 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.66■□□□□ 0.74
USP1O94782 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP1O94782 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.66■□□□□ 0.74
USP1O94782 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
USP1O94782 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP1O94782 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.66■□□□□ 0.74
USP1O94782 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.66■□□□□ 0.74
USP1O94782 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
USP1O94782 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP1O94782 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.66■□□□□ 0.74
USP1O94782 AC006557.6-201ENST00000623071 864 ntBASIC19.66■□□□□ 0.74
USP1O94782 MYC-209ENST00000641252 345 ntBASIC19.66■□□□□ 0.74
USP1O94782 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP1O94782 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP1O94782 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP1O94782 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
USP1O94782 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
USP1O94782 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP1O94782 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP1O94782 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP1O94782 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP1O94782 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
USP1O94782 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP1O94782 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
USP1O94782 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP1O94782 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP1O94782 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP1O94782 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.65■□□□□ 0.74
USP1O94782 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP1O94782 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP1O94782 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.65■□□□□ 0.74
USP1O94782 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP1O94782 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
USP1O94782 AL355802.2-201ENST00000402069 882 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms