Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EDF1O60869 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EDF1O60869 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.18■□□□□ 0.66
EDF1O60869 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EDF1O60869 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EDF1O60869 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
EDF1O60869 LINC02228-203ENST00000641970 1355 ntBASIC19.18■□□□□ 0.66
EDF1O60869 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EDF1O60869 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EDF1O60869 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EDF1O60869 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EDF1O60869 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EDF1O60869 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
EDF1O60869 AL512353.2-201ENST00000448759 1962 ntBASIC19.17■□□□□ 0.66
EDF1O60869 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EDF1O60869 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.17■□□□□ 0.66
EDF1O60869 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EDF1O60869 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EDF1O60869 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.17■□□□□ 0.66
EDF1O60869 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.17■□□□□ 0.66
EDF1O60869 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EDF1O60869 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EDF1O60869 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
EDF1O60869 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.17■□□□□ 0.66
EDF1O60869 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.17■□□□□ 0.66
EDF1O60869 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.17■□□□□ 0.66
EDF1O60869 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EDF1O60869 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EDF1O60869 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EDF1O60869 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EDF1O60869 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
EDF1O60869 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EDF1O60869 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.16■□□□□ 0.66
EDF1O60869 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EDF1O60869 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EDF1O60869 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EDF1O60869 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EDF1O60869 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.16■□□□□ 0.66
EDF1O60869 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EDF1O60869 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.16■□□□□ 0.66
EDF1O60869 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EDF1O60869 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EDF1O60869 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
EDF1O60869 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.16■□□□□ 0.66
EDF1O60869 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
EDF1O60869 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
EDF1O60869 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
EDF1O60869 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EDF1O60869 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EDF1O60869 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
EDF1O60869 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EDF1O60869 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.16■□□□□ 0.66
EDF1O60869 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
EDF1O60869 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EDF1O60869 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EDF1O60869 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.15■□□□□ 0.66
EDF1O60869 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.15■□□□□ 0.66
EDF1O60869 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
EDF1O60869 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EDF1O60869 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EDF1O60869 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.15■□□□□ 0.66
EDF1O60869 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.15■□□□□ 0.66
EDF1O60869 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
EDF1O60869 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.15■□□□□ 0.66
EDF1O60869 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EDF1O60869 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EDF1O60869 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
EDF1O60869 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
EDF1O60869 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EDF1O60869 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EDF1O60869 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.15■□□□□ 0.66
EDF1O60869 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
EDF1O60869 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EDF1O60869 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.15■□□□□ 0.66
EDF1O60869 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EDF1O60869 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
EDF1O60869 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EDF1O60869 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
EDF1O60869 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EDF1O60869 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.14■□□□□ 0.66
EDF1O60869 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
EDF1O60869 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.14■□□□□ 0.66
EDF1O60869 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
EDF1O60869 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.14■□□□□ 0.66
EDF1O60869 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.14■□□□□ 0.65
EDF1O60869 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EDF1O60869 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.14■□□□□ 0.65
EDF1O60869 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EDF1O60869 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
EDF1O60869 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EDF1O60869 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EDF1O60869 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
EDF1O60869 AL591742.1-201ENST00000604433 565 ntBASIC19.14■□□□□ 0.65
EDF1O60869 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EDF1O60869 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
EDF1O60869 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
EDF1O60869 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.14■□□□□ 0.65
EDF1O60869 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
EDF1O60869 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
EDF1O60869 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms