Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC23.82■■□□□ 1.4
GRIN3BO60391 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC23.82■■□□□ 1.4
GRIN3BO60391 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC23.82■■□□□ 1.4
GRIN3BO60391 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC23.82■■□□□ 1.4
GRIN3BO60391 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
GRIN3BO60391 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.82■■□□□ 1.4
GRIN3BO60391 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
GRIN3BO60391 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
GRIN3BO60391 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
GRIN3BO60391 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
GRIN3BO60391 IL9RP2-201ENST00000423948 1312 ntBASIC23.82■■□□□ 1.4
GRIN3BO60391 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
GRIN3BO60391 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC23.81■■□□□ 1.4
GRIN3BO60391 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
GRIN3BO60391 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
GRIN3BO60391 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
GRIN3BO60391 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC23.81■■□□□ 1.4
GRIN3BO60391 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC23.81■■□□□ 1.4
GRIN3BO60391 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC23.81■■□□□ 1.4
GRIN3BO60391 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.81■■□□□ 1.4
GRIN3BO60391 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
GRIN3BO60391 C1orf229-201ENST00000623686 2258 ntBASIC23.81■■□□□ 1.4
GRIN3BO60391 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.81■■□□□ 1.4
GRIN3BO60391 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
GRIN3BO60391 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
GRIN3BO60391 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
GRIN3BO60391 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
GRIN3BO60391 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC23.8■■□□□ 1.4
GRIN3BO60391 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC23.8■■□□□ 1.4
GRIN3BO60391 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
GRIN3BO60391 TSPY12P-201ENST00000421279 868 ntBASIC23.8■■□□□ 1.4
GRIN3BO60391 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
GRIN3BO60391 LINC00265-3P-201ENST00000447588 903 ntBASIC23.8■■□□□ 1.4
GRIN3BO60391 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GRIN3BO60391 KRT16P4-201ENST00000453883 522 ntBASIC23.8■■□□□ 1.4
GRIN3BO60391 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.8■■□□□ 1.4
GRIN3BO60391 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC23.8■■□□□ 1.4
GRIN3BO60391 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
GRIN3BO60391 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC23.8■■□□□ 1.4
GRIN3BO60391 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GRIN3BO60391 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
GRIN3BO60391 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.8■■□□□ 1.4
GRIN3BO60391 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
GRIN3BO60391 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GRIN3BO60391 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC23.79■■□□□ 1.4
GRIN3BO60391 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GRIN3BO60391 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
GRIN3BO60391 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
GRIN3BO60391 TPSP2-201ENST00000561760 610 ntBASIC23.79■■□□□ 1.4
GRIN3BO60391 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GRIN3BO60391 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GRIN3BO60391 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
GRIN3BO60391 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GRIN3BO60391 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.79■■□□□ 1.4
GRIN3BO60391 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
GRIN3BO60391 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GRIN3BO60391 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GRIN3BO60391 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GRIN3BO60391 DFFB-203ENST00000341385 572 ntTSL 5 BASIC23.78■■□□□ 1.4
GRIN3BO60391 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC23.78■■□□□ 1.4
GRIN3BO60391 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC23.78■■□□□ 1.4
GRIN3BO60391 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC23.78■■□□□ 1.4
GRIN3BO60391 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
GRIN3BO60391 AL353801.3-201ENST00000609898 542 ntBASIC23.78■■□□□ 1.4
GRIN3BO60391 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GRIN3BO60391 AC093525.10-201ENST00000625130 1569 ntBASIC23.78■■□□□ 1.4
GRIN3BO60391 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GRIN3BO60391 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.77■■□□□ 1.4
GRIN3BO60391 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GRIN3BO60391 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC23.77■■□□□ 1.4
GRIN3BO60391 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GRIN3BO60391 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.77■■□□□ 1.4
GRIN3BO60391 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.77■■□□□ 1.4
GRIN3BO60391 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GRIN3BO60391 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
GRIN3BO60391 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC23.77■■□□□ 1.4
GRIN3BO60391 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
GRIN3BO60391 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC23.77■■□□□ 1.4
GRIN3BO60391 PPIE-208ENST00000470213 927 ntTSL 3 BASIC23.77■■□□□ 1.4
GRIN3BO60391 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC23.77■■□□□ 1.4
GRIN3BO60391 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC23.77■■□□□ 1.4
GRIN3BO60391 CIB2-208ENST00000560618 804 ntTSL 2 BASIC23.77■■□□□ 1.4
GRIN3BO60391 AL160286.2-201ENST00000567150 934 ntBASIC23.77■■□□□ 1.4
GRIN3BO60391 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC23.77■■□□□ 1.4
GRIN3BO60391 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC23.77■■□□□ 1.4
GRIN3BO60391 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
GRIN3BO60391 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
GRIN3BO60391 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.77■■□□□ 1.4
GRIN3BO60391 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
GRIN3BO60391 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GRIN3BO60391 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC23.77■■□□□ 1.4
GRIN3BO60391 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
GRIN3BO60391 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
GRIN3BO60391 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
GRIN3BO60391 H19-201ENST00000411754 1788 ntTSL 5 BASIC23.76■■□□□ 1.39
GRIN3BO60391 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GRIN3BO60391 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GRIN3BO60391 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GRIN3BO60391 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GRIN3BO60391 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms