Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
ACTN4O43707 AC133041.1-202ENST00000642053 222 ntBASIC21.84■■□□□ 1.09
ACTN4O43707 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ACTN4O43707 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ACTN4O43707 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
ACTN4O43707 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ACTN4O43707 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ACTN4O43707 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ACTN4O43707 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ACTN4O43707 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ACTN4O43707 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.83■■□□□ 1.09
ACTN4O43707 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ACTN4O43707 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
ACTN4O43707 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.83■■□□□ 1.09
ACTN4O43707 YBX1P10-201ENST00000444752 975 ntBASIC21.83■■□□□ 1.09
ACTN4O43707 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.83■■□□□ 1.09
ACTN4O43707 AC090192.1-201ENST00000517740 490 ntBASIC21.83■■□□□ 1.09
ACTN4O43707 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.83■■□□□ 1.09
ACTN4O43707 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.83■■□□□ 1.09
ACTN4O43707 AP006587.1-201ENST00000534129 1502 ntBASIC21.83■■□□□ 1.09
ACTN4O43707 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.83■■□□□ 1.09
ACTN4O43707 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.83■■□□□ 1.08
ACTN4O43707 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
ACTN4O43707 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ACTN4O43707 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
ACTN4O43707 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ACTN4O43707 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
ACTN4O43707 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
ACTN4O43707 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.82■■□□□ 1.08
ACTN4O43707 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ACTN4O43707 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
ACTN4O43707 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
ACTN4O43707 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ACTN4O43707 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ACTN4O43707 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ACTN4O43707 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ACTN4O43707 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ACTN4O43707 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.82■■□□□ 1.08
ACTN4O43707 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ACTN4O43707 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
ACTN4O43707 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
ACTN4O43707 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.82■■□□□ 1.08
ACTN4O43707 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.82■■□□□ 1.08
ACTN4O43707 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ACTN4O43707 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.82■■□□□ 1.08
ACTN4O43707 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
ACTN4O43707 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ACTN4O43707 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
ACTN4O43707 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ACTN4O43707 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ACTN4O43707 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ACTN4O43707 AL161938.1-201ENST00000569833 2180 ntBASIC21.81■■□□□ 1.08
ACTN4O43707 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ACTN4O43707 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
ACTN4O43707 AC141586.3-201ENST00000562166 1838 ntBASIC21.81■■□□□ 1.08
ACTN4O43707 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ACTN4O43707 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ACTN4O43707 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.81■■□□□ 1.08
ACTN4O43707 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.81■■□□□ 1.08
ACTN4O43707 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ACTN4O43707 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.81■■□□□ 1.08
ACTN4O43707 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.81■■□□□ 1.08
ACTN4O43707 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ACTN4O43707 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ACTN4O43707 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ACTN4O43707 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ACTN4O43707 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.81■■□□□ 1.08
ACTN4O43707 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.81■■□□□ 1.08
ACTN4O43707 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ACTN4O43707 AC104417.2-201ENST00000562989 1793 ntBASIC21.81■■□□□ 1.08
ACTN4O43707 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
ACTN4O43707 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ACTN4O43707 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.81■■□□□ 1.08
ACTN4O43707 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
ACTN4O43707 AC093503.3-201ENST00000624917 2352 ntBASIC21.81■■□□□ 1.08
ACTN4O43707 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ACTN4O43707 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
ACTN4O43707 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.8■■□□□ 1.08
ACTN4O43707 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ACTN4O43707 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
ACTN4O43707 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ACTN4O43707 SDHAP1-207ENST00000440850 2000 ntBASIC21.8■■□□□ 1.08
ACTN4O43707 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ACTN4O43707 RNF165-205ENST00000588679 2904 ntBASIC21.8■■□□□ 1.08
ACTN4O43707 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.8■■□□□ 1.08
ACTN4O43707 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ACTN4O43707 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ACTN4O43707 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.8■■□□□ 1.08
ACTN4O43707 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ACTN4O43707 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.8■■□□□ 1.08
ACTN4O43707 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ACTN4O43707 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ACTN4O43707 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.8■■□□□ 1.08
ACTN4O43707 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.8■■□□□ 1.08
ACTN4O43707 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.8■■□□□ 1.08
ACTN4O43707 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.8■■□□□ 1.08
ACTN4O43707 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.8■■□□□ 1.08
ACTN4O43707 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.8■■□□□ 1.08
ACTN4O43707 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
ACTN4O43707 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms