Protein–RNA interactions for Protein: O43602

DCX, Neuronal migration protein doublecortin, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCXO43602 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
DCXO43602 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.55■□□□□ 0.88
DCXO43602 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DCXO43602 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DCXO43602 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DCXO43602 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.55■□□□□ 0.88
DCXO43602 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.55■□□□□ 0.88
DCXO43602 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DCXO43602 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DCXO43602 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DCXO43602 AC097488.1-201ENST00000507834 756 ntBASIC20.55■□□□□ 0.88
DCXO43602 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.55■□□□□ 0.88
DCXO43602 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.55■□□□□ 0.88
DCXO43602 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.55■□□□□ 0.88
DCXO43602 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
DCXO43602 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DCXO43602 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
DCXO43602 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DCXO43602 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DCXO43602 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DCXO43602 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DCXO43602 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DCXO43602 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
DCXO43602 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.54■□□□□ 0.88
DCXO43602 AC069148.1-201ENST00000608741 768 ntBASIC20.54■□□□□ 0.88
DCXO43602 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.54■□□□□ 0.88
DCXO43602 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DCXO43602 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
DCXO43602 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.54■□□□□ 0.88
DCXO43602 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.54■□□□□ 0.88
DCXO43602 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
DCXO43602 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
DCXO43602 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DCXO43602 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
DCXO43602 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DCXO43602 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DCXO43602 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCXO43602 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
DCXO43602 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCXO43602 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.53■□□□□ 0.88
DCXO43602 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCXO43602 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCXO43602 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCXO43602 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
DCXO43602 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.53■□□□□ 0.88
DCXO43602 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.53■□□□□ 0.88
DCXO43602 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.53■□□□□ 0.88
DCXO43602 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.53■□□□□ 0.88
DCXO43602 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DCXO43602 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCXO43602 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCXO43602 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DCXO43602 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCXO43602 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCXO43602 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
DCXO43602 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DCXO43602 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
DCXO43602 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DCXO43602 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.52■□□□□ 0.88
DCXO43602 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.52■□□□□ 0.88
DCXO43602 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.52■□□□□ 0.88
DCXO43602 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DCXO43602 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
DCXO43602 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.52■□□□□ 0.88
DCXO43602 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DCXO43602 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DCXO43602 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
DCXO43602 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DCXO43602 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.52■□□□□ 0.88
DCXO43602 AC246785.2-201ENST00000432512 513 ntBASIC20.52■□□□□ 0.88
DCXO43602 B3GAT3P1-201ENST00000471720 806 ntBASIC20.52■□□□□ 0.88
DCXO43602 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.52■□□□□ 0.88
DCXO43602 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.52■□□□□ 0.88
DCXO43602 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.52■□□□□ 0.88
DCXO43602 AC006538.3-201ENST00000612495 578 ntBASIC20.52■□□□□ 0.88
DCXO43602 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.52■□□□□ 0.88
DCXO43602 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DCXO43602 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.51■□□□□ 0.87
DCXO43602 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
DCXO43602 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DCXO43602 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DCXO43602 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.51■□□□□ 0.87
DCXO43602 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DCXO43602 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DCXO43602 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DCXO43602 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.51■□□□□ 0.87
DCXO43602 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.51■□□□□ 0.87
DCXO43602 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.51■□□□□ 0.87
DCXO43602 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
DCXO43602 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.51■□□□□ 0.87
DCXO43602 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.51■□□□□ 0.87
DCXO43602 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
DCXO43602 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.51■□□□□ 0.87
DCXO43602 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
DCXO43602 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
DCXO43602 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DCXO43602 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
DCXO43602 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
DCXO43602 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DCXO43602 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms