Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
KPNA4O00629 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KPNA4O00629 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
KPNA4O00629 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KPNA4O00629 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
KPNA4O00629 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.17■□□□□ 0.5
KPNA4O00629 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KPNA4O00629 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.16■□□□□ 0.5
KPNA4O00629 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KPNA4O00629 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.16■□□□□ 0.5
KPNA4O00629 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KPNA4O00629 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KPNA4O00629 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
KPNA4O00629 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.16■□□□□ 0.5
KPNA4O00629 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
KPNA4O00629 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KPNA4O00629 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.16■□□□□ 0.5
KPNA4O00629 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KPNA4O00629 AC022517.1-201ENST00000592429 346 ntBASIC18.16■□□□□ 0.5
KPNA4O00629 CYP2T3P-201ENST00000601990 817 ntBASIC18.16■□□□□ 0.5
KPNA4O00629 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
KPNA4O00629 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KPNA4O00629 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KPNA4O00629 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
KPNA4O00629 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
KPNA4O00629 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KPNA4O00629 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.16■□□□□ 0.5
KPNA4O00629 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KPNA4O00629 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KPNA4O00629 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KPNA4O00629 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
KPNA4O00629 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.15■□□□□ 0.5
KPNA4O00629 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KPNA4O00629 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.15■□□□□ 0.5
KPNA4O00629 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KPNA4O00629 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
KPNA4O00629 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KPNA4O00629 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KPNA4O00629 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.15■□□□□ 0.5
KPNA4O00629 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KPNA4O00629 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
KPNA4O00629 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.15■□□□□ 0.5
KPNA4O00629 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.15■□□□□ 0.5
KPNA4O00629 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KPNA4O00629 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.15■□□□□ 0.5
KPNA4O00629 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KPNA4O00629 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.15■□□□□ 0.5
KPNA4O00629 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KPNA4O00629 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KPNA4O00629 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KPNA4O00629 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.15■□□□□ 0.5
KPNA4O00629 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KPNA4O00629 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KPNA4O00629 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KPNA4O00629 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KPNA4O00629 KRT8P17-201ENST00000453110 1448 ntBASIC18.15■□□□□ 0.5
KPNA4O00629 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KPNA4O00629 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.14■□□□□ 0.5
KPNA4O00629 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
KPNA4O00629 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
KPNA4O00629 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
KPNA4O00629 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KPNA4O00629 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
KPNA4O00629 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
KPNA4O00629 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.14■□□□□ 0.49
KPNA4O00629 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KPNA4O00629 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.14■□□□□ 0.49
KPNA4O00629 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KPNA4O00629 AC004911.1-201ENST00000416316 871 ntBASIC18.14■□□□□ 0.49
KPNA4O00629 AC093787.1-201ENST00000450396 207 ntBASIC18.14■□□□□ 0.49
KPNA4O00629 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.14■□□□□ 0.49
KPNA4O00629 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KPNA4O00629 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.14■□□□□ 0.49
KPNA4O00629 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
KPNA4O00629 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
KPNA4O00629 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KPNA4O00629 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KPNA4O00629 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KPNA4O00629 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KPNA4O00629 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KPNA4O00629 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KPNA4O00629 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KPNA4O00629 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.13■□□□□ 0.49
KPNA4O00629 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
KPNA4O00629 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KPNA4O00629 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.13■□□□□ 0.49
KPNA4O00629 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
KPNA4O00629 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KPNA4O00629 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KPNA4O00629 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KPNA4O00629 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KPNA4O00629 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
KPNA4O00629 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KPNA4O00629 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.13■□□□□ 0.49
KPNA4O00629 AC005181.1-201ENST00000604782 1256 ntBASIC18.13■□□□□ 0.49
KPNA4O00629 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.13■□□□□ 0.49
KPNA4O00629 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.13■□□□□ 0.49
KPNA4O00629 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.13■□□□□ 0.49
KPNA4O00629 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
KPNA4O00629 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms