Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
EIF3FO00303 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.05■□□□□ 0.64
EIF3FO00303 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
EIF3FO00303 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EIF3FO00303 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
EIF3FO00303 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.05■□□□□ 0.64
EIF3FO00303 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
EIF3FO00303 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
EIF3FO00303 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EIF3FO00303 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EIF3FO00303 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.05■□□□□ 0.64
EIF3FO00303 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
EIF3FO00303 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.05■□□□□ 0.64
EIF3FO00303 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
EIF3FO00303 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
EIF3FO00303 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.05■□□□□ 0.64
EIF3FO00303 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EIF3FO00303 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
EIF3FO00303 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.05■□□□□ 0.64
EIF3FO00303 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EIF3FO00303 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.04■□□□□ 0.64
EIF3FO00303 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EIF3FO00303 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EIF3FO00303 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EIF3FO00303 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EIF3FO00303 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EIF3FO00303 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EIF3FO00303 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EIF3FO00303 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.04■□□□□ 0.64
EIF3FO00303 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EIF3FO00303 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
EIF3FO00303 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EIF3FO00303 AC133681.1-201ENST00000465482 601 ntBASIC19.04■□□□□ 0.64
EIF3FO00303 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
EIF3FO00303 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
EIF3FO00303 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.04■□□□□ 0.64
EIF3FO00303 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EIF3FO00303 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.04■□□□□ 0.64
EIF3FO00303 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.04■□□□□ 0.64
EIF3FO00303 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EIF3FO00303 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
EIF3FO00303 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
EIF3FO00303 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
EIF3FO00303 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.04■□□□□ 0.64
EIF3FO00303 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EIF3FO00303 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
EIF3FO00303 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
EIF3FO00303 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
EIF3FO00303 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
EIF3FO00303 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.03■□□□□ 0.64
EIF3FO00303 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.03■□□□□ 0.64
EIF3FO00303 C1QL1P1-201ENST00000568105 661 ntBASIC19.03■□□□□ 0.64
EIF3FO00303 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.03■□□□□ 0.64
EIF3FO00303 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.03■□□□□ 0.64
EIF3FO00303 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
EIF3FO00303 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
EIF3FO00303 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
EIF3FO00303 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
EIF3FO00303 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
EIF3FO00303 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.02■□□□□ 0.64
EIF3FO00303 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
EIF3FO00303 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
EIF3FO00303 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
EIF3FO00303 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
EIF3FO00303 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
EIF3FO00303 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.02■□□□□ 0.64
EIF3FO00303 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
EIF3FO00303 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
EIF3FO00303 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
EIF3FO00303 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
EIF3FO00303 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
EIF3FO00303 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
EIF3FO00303 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
EIF3FO00303 AC239809.2-201ENST00000415381 517 ntBASIC19.02■□□□□ 0.64
EIF3FO00303 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.02■□□□□ 0.64
EIF3FO00303 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
EIF3FO00303 AC233263.1-201ENST00000578059 224 ntBASIC19.02■□□□□ 0.64
EIF3FO00303 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.02■□□□□ 0.64
EIF3FO00303 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
EIF3FO00303 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
EIF3FO00303 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
EIF3FO00303 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.02■□□□□ 0.63
EIF3FO00303 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.02■□□□□ 0.63
EIF3FO00303 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.02■□□□□ 0.63
EIF3FO00303 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
EIF3FO00303 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
EIF3FO00303 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EIF3FO00303 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EIF3FO00303 AC104417.2-201ENST00000562989 1793 ntBASIC19.01■□□□□ 0.63
EIF3FO00303 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
EIF3FO00303 AL032819.2-201ENST00000624543 2162 ntBASIC19.01■□□□□ 0.63
EIF3FO00303 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EIF3FO00303 POU5F1P3-201ENST00000428824 1078 ntBASIC19.01■□□□□ 0.63
EIF3FO00303 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.01■□□□□ 0.63
EIF3FO00303 RN7SL471P-201ENST00000580476 299 ntBASIC19.01■□□□□ 0.63
EIF3FO00303 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EIF3FO00303 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.01■□□□□ 0.63
EIF3FO00303 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EIF3FO00303 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EIF3FO00303 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms