Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3B1O00203 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3B1O00203 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.66■□□□□ 0.74
AP3B1O00203 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP3B1O00203 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
AP3B1O00203 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP3B1O00203 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.66■□□□□ 0.74
AP3B1O00203 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3B1O00203 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
AP3B1O00203 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.66■□□□□ 0.74
AP3B1O00203 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3B1O00203 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3B1O00203 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3B1O00203 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.66■□□□□ 0.74
AP3B1O00203 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3B1O00203 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
AP3B1O00203 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
AP3B1O00203 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP3B1O00203 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.65■□□□□ 0.74
AP3B1O00203 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
AP3B1O00203 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3B1O00203 LINC01465-201ENST00000408887 1940 ntBASIC19.65■□□□□ 0.74
AP3B1O00203 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.65■□□□□ 0.74
AP3B1O00203 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.65■□□□□ 0.74
AP3B1O00203 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.65■□□□□ 0.74
AP3B1O00203 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.65■□□□□ 0.74
AP3B1O00203 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.65■□□□□ 0.74
AP3B1O00203 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.65■□□□□ 0.74
AP3B1O00203 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.65■□□□□ 0.74
AP3B1O00203 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3B1O00203 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.65■□□□□ 0.74
AP3B1O00203 SOX15-203ENST00000570788 1093 ntBASIC19.65■□□□□ 0.74
AP3B1O00203 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.65■□□□□ 0.74
AP3B1O00203 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.65■□□□□ 0.74
AP3B1O00203 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3B1O00203 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP3B1O00203 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3B1O00203 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3B1O00203 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
AP3B1O00203 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP3B1O00203 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.65■□□□□ 0.74
AP3B1O00203 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.65■□□□□ 0.74
AP3B1O00203 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3B1O00203 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3B1O00203 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP3B1O00203 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3B1O00203 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3B1O00203 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP3B1O00203 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
AP3B1O00203 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
AP3B1O00203 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.64■□□□□ 0.74
AP3B1O00203 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
AP3B1O00203 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.64■□□□□ 0.73
AP3B1O00203 KRT18P16-201ENST00000510337 1294 ntBASIC19.64■□□□□ 0.73
AP3B1O00203 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.64■□□□□ 0.73
AP3B1O00203 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
AP3B1O00203 AC104771.1-201ENST00000603335 964 ntBASIC19.64■□□□□ 0.73
AP3B1O00203 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3B1O00203 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3B1O00203 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
AP3B1O00203 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3B1O00203 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3B1O00203 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3B1O00203 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
AP3B1O00203 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3B1O00203 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3B1O00203 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3B1O00203 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
AP3B1O00203 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3B1O00203 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
AP3B1O00203 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
AP3B1O00203 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.63■□□□□ 0.73
AP3B1O00203 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.63■□□□□ 0.73
AP3B1O00203 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3B1O00203 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3B1O00203 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
AP3B1O00203 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
AP3B1O00203 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.63■□□□□ 0.73
AP3B1O00203 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3B1O00203 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
AP3B1O00203 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3B1O00203 TUBB8P6-201ENST00000436895 1288 ntBASIC19.63■□□□□ 0.73
AP3B1O00203 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.63■□□□□ 0.73
AP3B1O00203 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.63■□□□□ 0.73
AP3B1O00203 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.63■□□□□ 0.73
AP3B1O00203 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3B1O00203 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
AP3B1O00203 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
AP3B1O00203 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
AP3B1O00203 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3B1O00203 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3B1O00203 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
AP3B1O00203 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3B1O00203 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3B1O00203 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3B1O00203 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.62■□□□□ 0.73
AP3B1O00203 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3B1O00203 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.62■□□□□ 0.73
AP3B1O00203 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.62■□□□□ 0.73
AP3B1O00203 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms