Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP27XA6NNY8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP27XA6NNY8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP27XA6NNY8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
USP27XA6NNY8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP27XA6NNY8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP27XA6NNY8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
USP27XA6NNY8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP27XA6NNY8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.03■□□□□ 0.96
USP27XA6NNY8 AC020916.1-201ENST00000587762 1774 ntBASIC21.02■□□□□ 0.96
USP27XA6NNY8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP27XA6NNY8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP27XA6NNY8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP27XA6NNY8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP27XA6NNY8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.02■□□□□ 0.96
USP27XA6NNY8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP27XA6NNY8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP27XA6NNY8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.02■□□□□ 0.96
USP27XA6NNY8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.02■□□□□ 0.96
USP27XA6NNY8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP27XA6NNY8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.02■□□□□ 0.96
USP27XA6NNY8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP27XA6NNY8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP27XA6NNY8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
USP27XA6NNY8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.02■□□□□ 0.96
USP27XA6NNY8 AC091305.1-201ENST00000479476 895 ntBASIC21.02■□□□□ 0.96
USP27XA6NNY8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.02■□□□□ 0.96
USP27XA6NNY8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
USP27XA6NNY8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
USP27XA6NNY8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
USP27XA6NNY8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
USP27XA6NNY8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP27XA6NNY8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP27XA6NNY8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP27XA6NNY8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.01■□□□□ 0.95
USP27XA6NNY8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP27XA6NNY8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
USP27XA6NNY8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.01■□□□□ 0.95
USP27XA6NNY8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.01■□□□□ 0.95
USP27XA6NNY8 SLC7A5P1-201ENST00000568957 537 ntBASIC21.01■□□□□ 0.95
USP27XA6NNY8 AL031432.3-201ENST00000607698 485 ntBASIC21.01■□□□□ 0.95
USP27XA6NNY8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.01■□□□□ 0.95
USP27XA6NNY8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
USP27XA6NNY8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP27XA6NNY8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP27XA6NNY8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
USP27XA6NNY8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.01■□□□□ 0.95
USP27XA6NNY8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.01■□□□□ 0.95
USP27XA6NNY8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP27XA6NNY8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
USP27XA6NNY8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP27XA6NNY8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.01■□□□□ 0.95
USP27XA6NNY8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.01■□□□□ 0.95
USP27XA6NNY8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP27XA6NNY8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
USP27XA6NNY8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP27XA6NNY8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP27XA6NNY8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP27XA6NNY8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP27XA6NNY8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP27XA6NNY8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP27XA6NNY8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
USP27XA6NNY8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21■□□□□ 0.95
USP27XA6NNY8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21■□□□□ 0.95
USP27XA6NNY8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21■□□□□ 0.95
USP27XA6NNY8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP27XA6NNY8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21■□□□□ 0.95
USP27XA6NNY8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP27XA6NNY8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP27XA6NNY8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP27XA6NNY8 AC012313.1-201ENST00000593393 3059 ntBASIC21■□□□□ 0.95
USP27XA6NNY8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP27XA6NNY8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21■□□□□ 0.95
USP27XA6NNY8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.99■□□□□ 0.95
USP27XA6NNY8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP27XA6NNY8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
USP27XA6NNY8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
USP27XA6NNY8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP27XA6NNY8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.99■□□□□ 0.95
USP27XA6NNY8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.99■□□□□ 0.95
USP27XA6NNY8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.99■□□□□ 0.95
USP27XA6NNY8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP27XA6NNY8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.99■□□□□ 0.95
USP27XA6NNY8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP27XA6NNY8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP27XA6NNY8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
USP27XA6NNY8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP27XA6NNY8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP27XA6NNY8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
USP27XA6NNY8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP27XA6NNY8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP27XA6NNY8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP27XA6NNY8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
USP27XA6NNY8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP27XA6NNY8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP27XA6NNY8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP27XA6NNY8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP27XA6NNY8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP27XA6NNY8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.98■□□□□ 0.95
USP27XA6NNY8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms