Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AC022517.1-201ENST00000592429 346 ntBASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF103-CHMP3A0A140T963 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 AL589743.5-201ENST00000616611 1050 ntBASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 KRT8P20-201ENST00000423953 1409 ntBASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 AC010980.2-201ENST00000587099 1412 ntBASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF103-CHMP3A0A140T963 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 AC005181.1-201ENST00000604782 1256 ntBASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 KRT16P6-202ENST00000425692 1426 ntBASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
RNF103-CHMP3A0A140T963 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 AC093787.1-201ENST00000450396 207 ntBASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF103-CHMP3A0A140T963 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RNF103-CHMP3A0A140T963 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.71■□□□□ 0.58
RNF103-CHMP3A0A140T963 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF103-CHMP3A0A140T963 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms