Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 AC116562.4-201ENST00000641316 2276 ntBASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 ANKRD20A6P-201ENST00000618763 204 ntBASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV8-4A0A0B4J246 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 AC007322.1-201ENST00000426983 750 ntBASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 AL162430.1-201ENST00000480705 870 ntBASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 DUX4L16-201ENST00000555130 1264 ntBASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 AL512408.1-201ENST00000569378 2000 ntBASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-4A0A0B4J246 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms