Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 TUBB8P6-201ENST00000436895 1288 ntBASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 AC110285.5-201ENST00000611501 352 ntBASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 AC004264.1-201ENST00000608354 794 ntBASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 AL158211.5-201ENST00000623583 2518 ntBASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.72■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 KRT8P8-201ENST00000434750 1448 ntBASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFSF12-TNFSF13A0A0A6YY99 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.71■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms