Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LDLRAP1Q5SW96 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
LDLRAP1Q5SW96 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LDLRAP1Q5SW96 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LDLRAP1Q5SW96 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 DDX18P5-201ENST00000534547 1306 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 RNU6-225P-201ENST00000384613 103 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 AL034374.1-201ENST00000406329 351 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 AL590762.4-201ENST00000425885 253 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 RPS17P8-201ENST00000434525 335 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 CACYBPP1-201ENST00000438592 684 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 OR1H1P-201ENST00000448731 937 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 OTX2P1-201ENST00000450956 354 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 RPL10P17-201ENST00000453852 316 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 AC091685.2-201ENST00000454924 864 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 RPS5P7-201ENST00000456664 608 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 RPL5P13-201ENST00000462840 709 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 RPL21P6-201ENST00000479171 504 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 RNU6-709P-201ENST00000517257 104 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 AL031320.1-201ENST00000604177 357 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 AL049539.1-201ENST00000611964 459 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 AL022401.1-201ENST00000619498 108 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 MIR6730-201ENST00000622213 67 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 AC006453.5-201ENST00000636451 619 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 NCLP2-201ENST00000416078 1462 ntBASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
LDLRAP1Q5SW96 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 GSTA12P-201ENST00000402398 508 ntBASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 RNA5SP113-201ENST00000410486 84 ntBASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 LINC00993-201ENST00000420453 540 ntBASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 RPS26P4-201ENST00000431743 355 ntBASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 RSL24D1P2-201ENST00000445584 366 ntBASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 CASP3P1-201ENST00000446037 609 ntBASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 PSMC1P13-201ENST00000458195 985 ntBASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 AC063943.1-201ENST00000465434 453 ntBASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 AC092324.1-201ENST00000468671 324 ntBASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 AC231760.1-201ENST00000498002 260 ntBASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 RNA5SP249-201ENST00000516127 99 ntBASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 MIR3667-201ENST00000581025 74 ntBASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 AL512782.1-201ENST00000603093 364 ntBASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 AC011453.2-201ENST00000603737 729 ntBASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 AP003499.2-201ENST00000624100 483 ntBASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 AP002967.1-201ENST00000624203 539 ntBASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 AC107068.1-201ENST00000563286 4218 ntBASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.78□□□□□ -1.64
LDLRAP1Q5SW96 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
LDLRAP1Q5SW96 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.77□□□□□ -1.65
LDLRAP1Q5SW96 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
LDLRAP1Q5SW96 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LDLRAP1Q5SW96 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms