RNA–Protein interactions for RNA: ENST00000523832.1

CDKL3-210, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKL3, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-210ENST00000523832 AEBP2Q6ZN18 517 aaPredicted RBP19.3■□□□□ 0.68
CDKL3-210ENST00000523832 CHIC1Q5VXU3 224 aa18.43■□□□□ 0.54
CDKL3-210ENST00000523832 SENP3Q9H4L4 574 aaPredicted RBP16.45■□□□□ 0.22
CDKL3-210ENST00000523832 PHF23Q9BUL5 403 aaPredicted RBP16.25■□□□□ 0.19
CDKL3-210ENST00000523832 FOXD1Q16676 465 aa15.32■□□□□ 0.04
CDKL3-210ENST00000523832 PLPPR3Q6T4P5 718 aa14.77□□□□□ -0.04
CDKL3-210ENST00000523832 PPP6R1Q9UPN7 881 aa14.41□□□□□ -0.1
CDKL3-210ENST00000523832 ADRA2BP18089 450 aa14.36□□□□□ -0.11
CDKL3-210ENST00000523832 PIAS4Q8N2W9 510 aaPredicted RBP14.33□□□□□ -0.12
CDKL3-210ENST00000523832 MSH5O43196 834 aa14.3□□□□□ -0.12
CDKL3-210ENST00000523832 POTEDQ86YR6 584 aa13.78□□□□□ -0.2
CDKL3-210ENST00000523832 MAPK8IP2Q13387 824 aaPredicted RBP13.16□□□□□ -0.3
CDKL3-210ENST00000523832 SCAF1Q9H7N4 1312 aaKnown RBP13.15□□□□□ -0.31
CDKL3-210ENST00000523832 DMRT2Q9Y5R5 561 aa13.05□□□□□ -0.32
CDKL3-210ENST00000523832 PPP4R3CPQ6ZMV5 832 aa12.96□□□□□ -0.33
CDKL3-210ENST00000523832 CNKSR2Q8WXI2 1034 aa12.7□□□□□ -0.38
CDKL3-210ENST00000523832 HOXD11P31277 338 aaPredicted RBP12.62□□□□□ -0.39
CDKL3-210ENST00000523832 RNF216Q9NWF9 866 aaPredicted RBP12.56□□□□□ -0.4
CDKL3-210ENST00000523832 DCAF8L1A6NGE4 600 aa12.5□□□□□ -0.41
CDKL3-210ENST00000523832 NCBP3Q53F19 620 aaKnown RBP12.49□□□□□ -0.41
CDKL3-210ENST00000523832 NPM3O75607 178 aaKnown RBP12.32□□□□□ -0.44
CDKL3-210ENST00000523832 RNF39Q9H2S5 420 aa12.21□□□□□ -0.46
CDKL3-210ENST00000523832 CACNB1Q02641 598 aaPredicted RBP12.2□□□□□ -0.46
CDKL3-210ENST00000523832 DNAJC5BQ9UF47 199 aa12.18□□□□□ -0.46
CDKL3-210ENST00000523832 KCNA4P22459 653 aa12.16□□□□□ -0.46
CDKL3-210ENST00000523832 C1QBPQ07021 282 aaKnown RBP12.04□□□□□ -0.48
CDKL3-210ENST00000523832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.01□□□□□ -0.49
CDKL3-210ENST00000523832 EHMT2Q96KQ7 1210 aa11.8□□□□□ -0.52
CDKL3-210ENST00000523832 U3KPZ7 1027 aaPredicted RBP11.79□□□□□ -0.52
CDKL3-210ENST00000523832 SLC4A2P04920 1241 aa11.74□□□□□ -0.53
CDKL3-210ENST00000523832 SPINK5Q9NQ38 1064 aaPredicted RBP11.58□□□□□ -0.56
CDKL3-210ENST00000523832 CAPN15O75808 1086 aa11.55□□□□□ -0.56
CDKL3-210ENST00000523832 SLC4A1APQ9BWU0 796 aaKnown RBP11.5□□□□□ -0.57
CDKL3-210ENST00000523832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.49□□□□□ -0.57
CDKL3-210ENST00000523832 HNRNPUL2Q1KMD3 747 aaKnown RBP11.49□□□□□ -0.57
CDKL3-210ENST00000523832 DSG3P32926 999 aa11.47□□□□□ -0.57
CDKL3-210ENST00000523832 APLP2Q06481 763 aa11.45□□□□□ -0.58
CDKL3-210ENST00000523832 SAMD1Q6SPF0 538 aaPredicted RBP11.42□□□□□ -0.58
CDKL3-210ENST00000523832 SLC24A1O60721 1099 aa11.4□□□□□ -0.58
CDKL3-210ENST00000523832 TRHP20396 242 aaPredicted RBP11.4□□□□□ -0.59
CDKL3-210ENST00000523832 ZNF219Q9P2Y4 722 aaPredicted RBP11.39□□□□□ -0.59
CDKL3-210ENST00000523832 MYCNP04198 464 aaPredicted RBP11.38□□□□□ -0.59
CDKL3-210ENST00000523832 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
CDKL3-210ENST00000523832 ABCB7O75027 752 aa11.29□□□□□ -0.6
CDKL3-210ENST00000523832 CSRNP3Q8WYN3 585 aa11.25□□□□□ -0.61
CDKL3-210ENST00000523832 ZBTB22O15209 634 aa11.19□□□□□ -0.62
CDKL3-210ENST00000523832 POLA2Q14181 598 aa11.12□□□□□ -0.63
CDKL3-210ENST00000523832 ATF5Q9Y2D1 282 aaPredicted RBP11.12□□□□□ -0.63
CDKL3-210ENST00000523832 ATXN8OSP0DMR3 200 aa10.97□□□□□ -0.65
CDKL3-210ENST00000523832 RBM42Q9BTD8 480 aaKnown RBP10.94□□□□□ -0.66
CDKL3-210ENST00000523832 AMER1Q5JTC6 1135 aaPredicted RBP10.91□□□□□ -0.66
CDKL3-210ENST00000523832 ZBTB12Q9Y330 459 aaPredicted RBP10.89□□□□□ -0.67
CDKL3-210ENST00000523832 RTN4Q9NQC3 1192 aaKnown RBP10.86□□□□□ -0.67
CDKL3-210ENST00000523832 POTEHQ6S545 545 aa10.82□□□□□ -0.68
CDKL3-210ENST00000523832 OSCARQ8IYS5 282 aa10.75□□□□□ -0.69
CDKL3-210ENST00000523832 AKT1S1Q96B36 256 aa10.71□□□□□ -0.69
CDKL3-210ENST00000523832 FBLN2P98095 1184 aa10.66□□□□□ -0.7
CDKL3-210ENST00000523832 CHRDL2Q6WN34 429 aa10.66□□□□□ -0.7
CDKL3-210ENST00000523832 MKRN4PQ13434 485 aaPredicted RBP10.61□□□□□ -0.71
CDKL3-210ENST00000523832 REM2Q8IYK8 340 aaPredicted RBP10.6□□□□□ -0.71
CDKL3-210ENST00000523832 SPDYE2BA6NHP3 402 aa10.57□□□□□ -0.72
CDKL3-210ENST00000523832 SPDYE6P0CI01 402 aa10.57□□□□□ -0.72
CDKL3-210ENST00000523832 SPDYE2Q495Y8 402 aa10.57□□□□□ -0.72
CDKL3-210ENST00000523832 PITPNM1O00562 1244 aa10.48□□□□□ -0.73
CDKL3-210ENST00000523832 ZNF692Q9BU19 519 aaPredicted RBP10.46□□□□□ -0.74
CDKL3-210ENST00000523832 SSUH2Q9Y2M2 353 aa10.44□□□□□ -0.74
CDKL3-210ENST00000523832 PIP4P2Q8N4L2 257 aa10.42□□□□□ -0.74
CDKL3-210ENST00000523832 FXR2P51116 673 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDKL3-210ENST00000523832 SPDYE1Q8NFV5 336 aaPredicted RBP10.35□□□□□ -0.75
CDKL3-210ENST00000523832 CLEC11AQ9Y240 323 aa10.33□□□□□ -0.76
CDKL3-210ENST00000523832 PABPN1Q86U42 306 aaKnown RBP eCLIP10.31□□□□□ -0.76
CDKL3-210ENST00000523832 PRKAR2AP13861 404 aaKnown RBP10.22□□□□□ -0.77
CDKL3-210ENST00000523832 HAX1O00165 279 aa10.21□□□□□ -0.78
CDKL3-210ENST00000523832 SP7Q8TDD2 431 aaPredicted RBP10.19□□□□□ -0.78
CDKL3-210ENST00000523832 PRR29P0C7W0 189 aa10.18□□□□□ -0.78
CDKL3-210ENST00000523832 SPDYE4A6NLX3 237 aa10.16□□□□□ -0.78
CDKL3-210ENST00000523832 CHADLQ6NUI6 762 aa10.13□□□□□ -0.79
CDKL3-210ENST00000523832 FKBP8Q14318 412 aa10.11□□□□□ -0.79
CDKL3-210ENST00000523832 EVX2Q03828 476 aa10.09□□□□□ -0.79
CDKL3-210ENST00000523832 STAG3Q9UJ98 1225 aa10.05□□□□□ -0.8
CDKL3-210ENST00000523832 C19orf67A6NJJ6 358 aa10.04□□□□□ -0.8
CDKL3-210ENST00000523832 BCANQ96GW7 911 aa9.99□□□□□ -0.81
CDKL3-210ENST00000523832 FARP1Q9Y4F1 1045 aaPredicted RBP9.99□□□□□ -0.81
CDKL3-210ENST00000523832 PLCB2Q00722 1185 aa9.98□□□□□ -0.81
CDKL3-210ENST00000523832 CREBZFQ9NS37 354 aa9.95□□□□□ -0.82
CDKL3-210ENST00000523832 PROM2Q8N271 834 aa9.94□□□□□ -0.82
CDKL3-210ENST00000523832 PRKCSHP14314 528 aaPredicted RBP9.93□□□□□ -0.82
CDKL3-210ENST00000523832 CD44P16070 742 aaKnown RBP9.9□□□□□ -0.82
CDKL3-210ENST00000523832 TAOK2Q9UL54 1235 aa9.9□□□□□ -0.82
CDKL3-210ENST00000523832 GABBR2O75899 941 aa9.87□□□□□ -0.83
CDKL3-210ENST00000523832 HAP1P54257 671 aaPredicted RBP9.85□□□□□ -0.83
CDKL3-210ENST00000523832 MNX1P50219 401 aaPredicted RBP9.81□□□□□ -0.84
CDKL3-210ENST00000523832 NPM1P06748 294 aaKnown RBP eCLIP9.77□□□□□ -0.84
CDKL3-210ENST00000523832 ZRANB1Q9UGI0 708 aa9.77□□□□□ -0.84
CDKL3-210ENST00000523832 CLCN6P51797 869 aa9.77□□□□□ -0.85
CDKL3-210ENST00000523832 VSIG10Q8N0Z9 540 aa9.77□□□□□ -0.85
CDKL3-210ENST00000523832 DAXXQ9UER7 740 aaPredicted RBP9.77□□□□□ -0.85
CDKL3-210ENST00000523832 ZNF579Q8NAF0 562 aaKnown RBP9.76□□□□□ -0.85
CDKL3-210ENST00000523832 PAK3O75914 559 aaPredicted RBP9.72□□□□□ -0.85
CDKL3-210ENST00000523832 TPRNQ4KMQ1 711 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms