RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 AEBP2Q6ZN18 517 aaPredicted RBP17.25■□□□□ 0.35
TCN1-201ENST00000257264 CHIC1Q5VXU3 224 aa16.31■□□□□ 0.2
TCN1-201ENST00000257264 SENP3Q9H4L4 574 aaPredicted RBP14.96□□□□□ -0.01
TCN1-201ENST00000257264 PHF23Q9BUL5 403 aaPredicted RBP14.64□□□□□ -0.07
TCN1-201ENST00000257264 FOXD1Q16676 465 aa13.92□□□□□ -0.18
TCN1-201ENST00000257264 POTEDQ86YR6 584 aa13.82□□□□□ -0.2
TCN1-201ENST00000257264 MSH5O43196 834 aa13.34□□□□□ -0.27
TCN1-201ENST00000257264 PLPPR3Q6T4P5 718 aa13.29□□□□□ -0.28
TCN1-201ENST00000257264 PIAS4Q8N2W9 510 aaPredicted RBP12.94□□□□□ -0.34
TCN1-201ENST00000257264 EHMT2Q96KQ7 1210 aa12.75□□□□□ -0.37
TCN1-201ENST00000257264 PPP6R1Q9UPN7 881 aa12.56□□□□□ -0.4
TCN1-201ENST00000257264 ADRA2BP18089 450 aa12.55□□□□□ -0.4
TCN1-201ENST00000257264 KCNA4P22459 653 aa12.52□□□□□ -0.41
TCN1-201ENST00000257264 CSRNP3Q8WYN3 585 aa12.18□□□□□ -0.46
TCN1-201ENST00000257264 SLC4A1APQ9BWU0 796 aaKnown RBP12.09□□□□□ -0.47
TCN1-201ENST00000257264 SLC24A1O60721 1099 aa11.85□□□□□ -0.51
TCN1-201ENST00000257264 PPP4R3CPQ6ZMV5 832 aa11.81□□□□□ -0.52
TCN1-201ENST00000257264 CACNB1Q02641 598 aaPredicted RBP11.79□□□□□ -0.52
TCN1-201ENST00000257264 NCBP3Q53F19 620 aaKnown RBP11.79□□□□□ -0.52
TCN1-201ENST00000257264 DMRT2Q9Y5R5 561 aa11.73□□□□□ -0.53
TCN1-201ENST00000257264 SCAF1Q9H7N4 1312 aaKnown RBP11.66□□□□□ -0.54
TCN1-201ENST00000257264 MAPK8IP2Q13387 824 aaPredicted RBP11.66□□□□□ -0.54
TCN1-201ENST00000257264 NPM3O75607 178 aaKnown RBP11.58□□□□□ -0.56
TCN1-201ENST00000257264 AMER1Q5JTC6 1135 aaPredicted RBP11.55□□□□□ -0.56
TCN1-201ENST00000257264 RTN4Q9NQC3 1192 aaKnown RBP11.53□□□□□ -0.56
TCN1-201ENST00000257264 ZBTB22O15209 634 aa11.51□□□□□ -0.57
TCN1-201ENST00000257264 DCAF8L1A6NGE4 600 aa11.39□□□□□ -0.59
TCN1-201ENST00000257264 CNKSR2Q8WXI2 1034 aa11.29□□□□□ -0.6
TCN1-201ENST00000257264 FOXD4L1Q9NU39 408 aa11.28□□□□□ -0.6
TCN1-201ENST00000257264 RNF39Q9H2S5 420 aa11.24□□□□□ -0.61
TCN1-201ENST00000257264 C1QBPQ07021 282 aaKnown RBP11.13□□□□□ -0.63
TCN1-201ENST00000257264 DNAJC5BQ9UF47 199 aa11.11□□□□□ -0.63
TCN1-201ENST00000257264 HOXD11P31277 338 aaPredicted RBP11.08□□□□□ -0.64
TCN1-201ENST00000257264 FKBP8Q14318 412 aa10.97□□□□□ -0.65
TCN1-201ENST00000257264 RNF216Q9NWF9 866 aaPredicted RBP10.9□□□□□ -0.67
TCN1-201ENST00000257264 ATXN8OSP0DMR3 200 aa10.82□□□□□ -0.68
TCN1-201ENST00000257264 POTEHQ6S545 545 aa10.76□□□□□ -0.69
TCN1-201ENST00000257264 SLC4A2P04920 1241 aa10.7□□□□□ -0.7
TCN1-201ENST00000257264 MYCNP04198 464 aaPredicted RBP10.69□□□□□ -0.7
TCN1-201ENST00000257264 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.67□□□□□ -0.7
TCN1-201ENST00000257264 PLCB2Q00722 1185 aa10.6□□□□□ -0.71
TCN1-201ENST00000257264 BCANQ96GW7 911 aa10.5□□□□□ -0.73
TCN1-201ENST00000257264 HAP1P54257 671 aaPredicted RBP10.45□□□□□ -0.74
TCN1-201ENST00000257264 PRKCSHP14314 528 aaPredicted RBP10.42□□□□□ -0.74
TCN1-201ENST00000257264 CAPN15O75808 1086 aa10.39□□□□□ -0.75
TCN1-201ENST00000257264 TAOK2Q9UL54 1235 aa10.39□□□□□ -0.75
TCN1-201ENST00000257264 FBXO3Q9UK99 471 aa10.38□□□□□ -0.75
TCN1-201ENST00000257264 DSG3P32926 999 aa10.35□□□□□ -0.75
TCN1-201ENST00000257264 VSIG10Q8N0Z9 540 aa10.34□□□□□ -0.75
TCN1-201ENST00000257264 ATF5Q9Y2D1 282 aaPredicted RBP10.31□□□□□ -0.76
TCN1-201ENST00000257264 DCAF8L2P0C7V8 631 aa10.29□□□□□ -0.76
TCN1-201ENST00000257264 SPINK5Q9NQ38 1064 aaPredicted RBP10.26□□□□□ -0.77
TCN1-201ENST00000257264 U3KPZ7 1027 aaPredicted RBP10.26□□□□□ -0.77
TCN1-201ENST00000257264 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.22□□□□□ -0.77
TCN1-201ENST00000257264 HNRNPUL2Q1KMD3 747 aaKnown RBP10.22□□□□□ -0.77
TCN1-201ENST00000257264 SAMD1Q6SPF0 538 aaPredicted RBP10.22□□□□□ -0.77
TCN1-201ENST00000257264 TPRNQ4KMQ1 711 aa10.21□□□□□ -0.78
TCN1-201ENST00000257264 VASPP50552 380 aaPredicted RBP10.18□□□□□ -0.78
TCN1-201ENST00000257264 SPDYE4A6NLX3 237 aa10.14□□□□□ -0.79
TCN1-201ENST00000257264 APLP2Q06481 763 aa10.14□□□□□ -0.79
TCN1-201ENST00000257264 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.11□□□□□ -0.79
TCN1-201ENST00000257264 PKD2Q13563 968 aa10.09□□□□□ -0.79
TCN1-201ENST00000257264 IFNLR1Q8IU57 520 aaPredicted RBP10.09□□□□□ -0.79
TCN1-201ENST00000257264 KDM2AQ9Y2K7 1162 aa10.09□□□□□ -0.79
TCN1-201ENST00000257264 TRHP20396 242 aaPredicted RBP10.09□□□□□ -0.79
TCN1-201ENST00000257264 PROM2Q8N271 834 aa10.07□□□□□ -0.8
TCN1-201ENST00000257264 ZNF219Q9P2Y4 722 aaPredicted RBP10.07□□□□□ -0.8
TCN1-201ENST00000257264 BBXQ8WY36 941 aaPredicted RBP10.06□□□□□ -0.8
TCN1-201ENST00000257264 ABCB7O75027 752 aa10.05□□□□□ -0.8
TCN1-201ENST00000257264 FBLN2P98095 1184 aa10.02□□□□□ -0.81
TCN1-201ENST00000257264 RBM42Q9BTD8 480 aaKnown RBP10.02□□□□□ -0.81
TCN1-201ENST00000257264 PAXIP1Q6ZW49 1069 aaPredicted RBP10.01□□□□□ -0.81
TCN1-201ENST00000257264 CFAP44Q96MT7 982 aa9.97□□□□□ -0.81
TCN1-201ENST00000257264 CHRDL2Q6WN34 429 aa9.93□□□□□ -0.82
TCN1-201ENST00000257264 NPM1P06748 294 aaKnown RBP eCLIP9.91□□□□□ -0.82
TCN1-201ENST00000257264 MKRN4PQ13434 485 aaPredicted RBP9.91□□□□□ -0.82
TCN1-201ENST00000257264 ECM2O94769 699 aaPredicted RBP9.9□□□□□ -0.82
TCN1-201ENST00000257264 SPRYD3Q8NCJ5 442 aa9.89□□□□□ -0.83
TCN1-201ENST00000257264 TIMELESSQ9UNS1 1208 aa9.88□□□□□ -0.83
TCN1-201ENST00000257264 TULP1O00294 542 aaPredicted RBP9.87□□□□□ -0.83
TCN1-201ENST00000257264 SPOCK2Q92563 424 aa9.86□□□□□ -0.83
TCN1-201ENST00000257264 TSHZ2Q9NRE2 1034 aa9.86□□□□□ -0.83
TCN1-201ENST00000257264 SP7Q8TDD2 431 aaPredicted RBP9.84□□□□□ -0.83
TCN1-201ENST00000257264 ARXQ96QS3 562 aa9.84□□□□□ -0.83
TCN1-201ENST00000257264 DAXXQ9UER7 740 aaPredicted RBP9.84□□□□□ -0.83
TCN1-201ENST00000257264 NBR1Q14596 966 aa9.84□□□□□ -0.83
TCN1-201ENST00000257264 ERICH6Q7L0X2 663 aa9.84□□□□□ -0.83
TCN1-201ENST00000257264 KLHL34Q8N239 644 aa9.84□□□□□ -0.83
TCN1-201ENST00000257264 GTF3C3Q9Y5Q9 886 aa9.81□□□□□ -0.84
TCN1-201ENST00000257264 RGL2O15211 777 aa9.75□□□□□ -0.85
TCN1-201ENST00000257264 DNAJC5Q9H3Z4 198 aa9.73□□□□□ -0.85
TCN1-201ENST00000257264 CHGAP10645 457 aaKnown RBP9.69□□□□□ -0.86
TCN1-201ENST00000257264 POLA2Q14181 598 aa9.67□□□□□ -0.86
TCN1-201ENST00000257264 STAG3Q9UJ98 1225 aa9.65□□□□□ -0.86
TCN1-201ENST00000257264 AKT1S1Q96B36 256 aa9.64□□□□□ -0.87
TCN1-201ENST00000257264 TMEM132AQ24JP5 1023 aa9.63□□□□□ -0.87
TCN1-201ENST00000257264 PLCD3Q8N3E9 789 aa9.63□□□□□ -0.87
TCN1-201ENST00000257264 HAX1O00165 279 aa9.62□□□□□ -0.87
TCN1-201ENST00000257264 HOMEZQ8IX15 550 aa9.61□□□□□ -0.87
TCN1-201ENST00000257264 PIP4P2Q8N4L2 257 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms