RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 CHIC1Q5VXU3 224 aa12.21□□□□□ -0.46
SYCP1-209ENST00000613524 AEBP2Q6ZN18 517 aaPredicted RBP12.18□□□□□ -0.46
SYCP1-209ENST00000613524 NISCHQ9Y2I1 1504 aa11.33□□□□□ -0.6
SYCP1-209ENST00000613524 PHF23Q9BUL5 403 aaPredicted RBP11.14□□□□□ -0.63
SYCP1-209ENST00000613524 POTEDQ86YR6 584 aa10.65□□□□□ -0.7
SYCP1-209ENST00000613524 EHMT2Q96KQ7 1210 aa10.5□□□□□ -0.73
SYCP1-209ENST00000613524 DCAF8L2P0C7V8 631 aa10.15□□□□□ -0.78
SYCP1-209ENST00000613524 ABCC9O60706 1549 aa10.14□□□□□ -0.79
SYCP1-209ENST00000613524 PLPPR3Q6T4P5 718 aa10.14□□□□□ -0.79
SYCP1-209ENST00000613524 KCNA4P22459 653 aa10.09□□□□□ -0.79
SYCP1-209ENST00000613524 ADRA2BP18089 450 aa10.07□□□□□ -0.8
SYCP1-209ENST00000613524 SENP3Q9H4L4 574 aaPredicted RBP9.86□□□□□ -0.83
SYCP1-209ENST00000613524 CCDC180Q9P1Z9 1646 aa9.85□□□□□ -0.83
SYCP1-209ENST00000613524 CSRNP3Q8WYN3 585 aa9.8□□□□□ -0.84
SYCP1-209ENST00000613524 PPP6R1Q9UPN7 881 aa9.74□□□□□ -0.85
SYCP1-209ENST00000613524 PABPN1Q86U42 306 aaKnown RBP eCLIP9.64□□□□□ -0.87
SYCP1-209ENST00000613524 SLC24A1O60721 1099 aa9.6□□□□□ -0.87
SYCP1-209ENST00000613524 SHROOM4Q9ULL8 1493 aa9.55□□□□□ -0.88
SYCP1-209ENST00000613524 RTN4Q9NQC3 1192 aaKnown RBP9.51□□□□□ -0.89
SYCP1-209ENST00000613524 SLC4A1APQ9BWU0 796 aaKnown RBP9.5□□□□□ -0.89
SYCP1-209ENST00000613524 RB1CC1Q8TDY2 1594 aa9.43□□□□□ -0.9
SYCP1-209ENST00000613524 ZBTB22O15209 634 aa9.41□□□□□ -0.9
SYCP1-209ENST00000613524 ZCCHC6Q5VYS8 1495 aaKnown RBP9.39□□□□□ -0.91
SYCP1-209ENST00000613524 SCRIBQ14160 1630 aa9.39□□□□□ -0.91
SYCP1-209ENST00000613524 NACADO15069 1562 aa9.35□□□□□ -0.91
SYCP1-209ENST00000613524 DNAJC5BQ9UF47 199 aa9.34□□□□□ -0.91
SYCP1-209ENST00000613524 FOXD1Q16676 465 aa9.29□□□□□ -0.92
SYCP1-209ENST00000613524 MSH5O43196 834 aa9.28□□□□□ -0.92
SYCP1-209ENST00000613524 UNC13AQ9UPW8 1703 aa9.22□□□□□ -0.93
SYCP1-209ENST00000613524 PPP4R3CPQ6ZMV5 832 aa9.19□□□□□ -0.94
SYCP1-209ENST00000613524 BICRAQ9NZM4 1560 aa9.14□□□□□ -0.95
SYCP1-209ENST00000613524 NPM3O75607 178 aaKnown RBP9.13□□□□□ -0.95
SYCP1-209ENST00000613524 DCAF1Q9Y4B6 1507 aa9.11□□□□□ -0.95
SYCP1-209ENST00000613524 MYO15BQ96JP2 1530 aa9.08□□□□□ -0.96
SYCP1-209ENST00000613524 CECR2Q9BXF3 1484 aa9.01□□□□□ -0.97
SYCP1-209ENST00000613524 SUPT5HO00267 1087 aaKnown RBP9.01□□□□□ -0.97
SYCP1-209ENST00000613524 CC2D2AQ9P2K1 1620 aa8.97□□□□□ -0.97
SYCP1-209ENST00000613524 EIF4G1Q04637 1599 aaKnown RBP8.97□□□□□ -0.97
SYCP1-209ENST00000613524 AMER1Q5JTC6 1135 aaPredicted RBP8.94□□□□□ -0.98
SYCP1-209ENST00000613524 PIAS4Q8N2W9 510 aaPredicted RBP8.91□□□□□ -0.98
SYCP1-209ENST00000613524 PRKCSHP14314 528 aaPredicted RBP8.88□□□□□ -0.99
SYCP1-209ENST00000613524 MROH2BQ7Z745 1585 aa8.85□□□□□ -0.99
SYCP1-209ENST00000613524 FKBP8Q14318 412 aa8.82□□□□□ -1
SYCP1-209ENST00000613524 NCBP3Q53F19 620 aaKnown RBP8.81□□□□□ -1
SYCP1-209ENST00000613524 SMARCA4P51532 1647 aa8.79□□□□□ -1
SYCP1-209ENST00000613524 BAZ1BQ9UIG0 1483 aaKnown RBP8.78□□□□□ -1
SYCP1-209ENST00000613524 ATAD2BQ9ULI0 1458 aa8.78□□□□□ -1
SYCP1-209ENST00000613524 WIZO95785 1651 aa8.77□□□□□ -1.01
SYCP1-209ENST00000613524 BAZ1AQ9NRL2 1556 aaPredicted RBP8.76□□□□□ -1.01
SYCP1-209ENST00000613524 NESP48681 1621 aa8.75□□□□□ -1.01
SYCP1-209ENST00000613524 RSF1Q96T23 1441 aaPredicted RBP8.73□□□□□ -1.01
SYCP1-209ENST00000613524 ERCC6Q03468 1493 aa8.72□□□□□ -1.01
SYCP1-209ENST00000613524 FOXD4L1Q9NU39 408 aa8.72□□□□□ -1.01
SYCP1-209ENST00000613524 MAPK8IP2Q13387 824 aaPredicted RBP8.72□□□□□ -1.01
SYCP1-209ENST00000613524 SMARCA2P51531 1590 aa8.69□□□□□ -1.02
SYCP1-209ENST00000613524 NCAPD3P42695 1498 aa8.67□□□□□ -1.02
SYCP1-209ENST00000613524 CNKSR2Q8WXI2 1034 aa8.57□□□□□ -1.04
SYCP1-209ENST00000613524 HMGXB3Q12766 1538 aa8.57□□□□□ -1.04
SYCP1-209ENST00000613524 CCDC88BA6NC98 1476 aa8.56□□□□□ -1.04
SYCP1-209ENST00000613524 CADPSQ9ULU8 1353 aa8.55□□□□□ -1.04
SYCP1-209ENST00000613524 TOP2AP11388 1531 aaKnown RBP8.53□□□□□ -1.04
SYCP1-209ENST00000613524 FBLN2P98095 1184 aa8.52□□□□□ -1.05
SYCP1-209ENST00000613524 SLC4A2P04920 1241 aa8.51□□□□□ -1.05
SYCP1-209ENST00000613524 PDS5BQ9NTI5 1447 aa8.5□□□□□ -1.05
SYCP1-209ENST00000613524 PEG3Q9GZU2 1588 aa8.5□□□□□ -1.05
SYCP1-209ENST00000613524 FANCD2Q9BXW9 1451 aa8.49□□□□□ -1.05
SYCP1-209ENST00000613524 KIF21AQ7Z4S6 1674 aa8.48□□□□□ -1.05
SYCP1-209ENST00000613524 CEP164Q9UPV0 1460 aa8.46□□□□□ -1.06
SYCP1-209ENST00000613524 HAP1P54257 671 aaPredicted RBP8.45□□□□□ -1.06
SYCP1-209ENST00000613524 PLCB2Q00722 1185 aa8.43□□□□□ -1.06
SYCP1-209ENST00000613524 FAM9AQ8IZU1 332 aaPredicted RBP8.43□□□□□ -1.06
SYCP1-209ENST00000613524 LAMC3Q9Y6N6 1575 aa8.43□□□□□ -1.06
SYCP1-209ENST00000613524 CFTRP13569 1480 aa8.42□□□□□ -1.06
SYCP1-209ENST00000613524 TTBK1Q5TCY1 1321 aaPredicted RBP8.42□□□□□ -1.06
SYCP1-209ENST00000613524 ATF5Q9Y2D1 282 aaPredicted RBP8.4□□□□□ -1.06
SYCP1-209ENST00000613524 TAOK2Q9UL54 1235 aa8.4□□□□□ -1.07
SYCP1-209ENST00000613524 ABCC8Q09428 1581 aa8.39□□□□□ -1.07
SYCP1-209ENST00000613524 RANGAP1P46060 587 aaPredicted RBP8.39□□□□□ -1.07
SYCP1-209ENST00000613524 TDRD9Q8NDG6 1382 aaKnown RBP8.39□□□□□ -1.07
SYCP1-209ENST00000613524 MRC2Q9UBG0 1479 aa8.39□□□□□ -1.07
SYCP1-209ENST00000613524 TPRNQ4KMQ1 711 aa8.38□□□□□ -1.07
SYCP1-209ENST00000613524 TRIM41Q8WV44 630 aa8.38□□□□□ -1.07
SYCP1-209ENST00000613524 URB2Q14146 1524 aaKnown RBP8.38□□□□□ -1.07
SYCP1-209ENST00000613524 RAD54L2Q9Y4B4 1467 aa8.37□□□□□ -1.07
SYCP1-209ENST00000613524 AQRO60306 1485 aaKnown RBP eCLIP8.35□□□□□ -1.07
SYCP1-209ENST00000613524 ZNF608Q9ULD9 1512 aaPredicted RBP8.34□□□□□ -1.07
SYCP1-209ENST00000613524 CACNB1Q02641 598 aaPredicted RBP8.34□□□□□ -1.07
SYCP1-209ENST00000613524 THOC2Q8NI27 1593 aaKnown RBP8.34□□□□□ -1.07
SYCP1-209ENST00000613524 TOPBP1Q92547 1522 aa8.32□□□□□ -1.08
SYCP1-209ENST00000613524 CUX2O14529 1486 aa8.31□□□□□ -1.08
SYCP1-209ENST00000613524 SOGA1O94964 1423 aa8.3□□□□□ -1.08
SYCP1-209ENST00000613524 CHMP7Q8WUX9 453 aaPredicted RBP8.29□□□□□ -1.08
SYCP1-209ENST00000613524 TIMELESSQ9UNS1 1208 aa8.29□□□□□ -1.08
SYCP1-209ENST00000613524 KDM2AQ9Y2K7 1162 aa8.29□□□□□ -1.08
SYCP1-209ENST00000613524 FGD5Q6ZNL6 1462 aa8.29□□□□□ -1.08
SYCP1-209ENST00000613524 WRNQ14191 1432 aaPredicted RBP eCLIP8.28□□□□□ -1.08
SYCP1-209ENST00000613524 POLA1P09884 1462 aaPredicted RBP8.27□□□□□ -1.09
SYCP1-209ENST00000613524 CUX1P39880 1505 aa8.27□□□□□ -1.09
SYCP1-209ENST00000613524 WDR62O43379 1518 aa8.26□□□□□ -1.09
SYCP1-209ENST00000613524 DNAJC5Q9H3Z4 198 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 993 ms